Analysis of interatomic Contacts of Structural Units in PDB entry:
7MGZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MGZ entry

There are 4 chains in PDB entry 7MGZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	MET 1	LEU 555
O	MET 1	LEU 555
P	MET 1	LEU 555
Q	MET 1	LEU 555

There are100 helices in PDB entry 7MGZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	15	30	Right-handed alpha
Helix 2	AA2	F	69	79	Right-handed alpha
Helix 3	AA3	F	83	85	Right-handed 310
Helix 4	AA4	F	90	103	Right-handed alpha
Helix 5	AA5	F	115	130	Right-handed alpha
Helix 6	AA6	F	156	170	Right-handed alpha
Helix 7	AA7	F	171	173	Right-handed 310
Helix 8	AA8	F	194	207	Right-handed alpha
Helix 9	AA9	F	223	235	Right-handed alpha
Helix 10	AB1	F	237	239	Right-handed 310
Helix 11	AB2	F	251	261	Right-handed alpha
Helix 12	AB3	F	261	270	Right-handed alpha
Helix 13	AB4	F	281	295	Right-handed alpha
Helix 14	AB5	F	310	313	Right-handed 310
Helix 15	AB6	F	314	328	Right-handed alpha
Helix 16	AB7	F	340	343	Right-handed 310
Helix 17	AB8	F	345	349	Right-handed 310
Helix 18	AB9	F	350	364	Right-handed alpha
Helix 19	AC1	F	377	391	Right-handed alpha
Helix 20	AC2	F	399	413	Right-handed alpha
Helix 21	AC3	F	462	468	Right-handed alpha
Helix 22	AC4	F	488	494	Right-handed alpha
Helix 23	AC5	F	526	531	Right-handed 310
Helix 24	AC6	F	537	548	Right-handed alpha
Helix 25	AC7	F	550	555	Right-handed alpha
Helix 26	AC8	O	15	30	Right-handed alpha
Helix 27	AC9	O	69	79	Right-handed alpha
Helix 28	AD1	O	83	85	Right-handed 310
Helix 29	AD2	O	90	103	Right-handed alpha
Helix 30	AD3	O	115	130	Right-handed alpha
Helix 31	AD4	O	156	170	Right-handed alpha
Helix 32	AD5	O	171	173	Right-handed 310
Helix 33	AD6	O	194	207	Right-handed alpha
Helix 34	AD7	O	223	235	Right-handed alpha
Helix 35	AD8	O	237	239	Right-handed 310
Helix 36	AD9	O	251	261	Right-handed alpha
Helix 37	AE1	O	261	270	Right-handed alpha
Helix 38	AE2	O	281	295	Right-handed alpha
Helix 39	AE3	O	310	313	Right-handed 310
Helix 40	AE4	O	314	328	Right-handed alpha
Helix 41	AE5	O	340	343	Right-handed 310
Helix 42	AE6	O	345	349	Right-handed 310
Helix 43	AE7	O	350	364	Right-handed alpha
Helix 44	AE8	O	377	391	Right-handed alpha
Helix 45	AE9	O	399	413	Right-handed alpha
Helix 46	AF1	O	462	468	Right-handed alpha
Helix 47	AF2	O	488	494	Right-handed alpha
Helix 48	AF3	O	526	531	Right-handed 310
Helix 49	AF4	O	537	548	Right-handed alpha
Helix 50	AF5	O	550	555	Right-handed alpha
Helix 51	AF6	P	15	30	Right-handed alpha
Helix 52	AF7	P	69	79	Right-handed alpha
Helix 53	AF8	P	83	85	Right-handed 310
Helix 54	AF9	P	90	103	Right-handed alpha
Helix 55	AG1	P	115	130	Right-handed alpha
Helix 56	AG2	P	156	170	Right-handed alpha
Helix 57	AG3	P	171	173	Right-handed 310
Helix 58	AG4	P	194	207	Right-handed alpha
Helix 59	AG5	P	223	235	Right-handed alpha
Helix 60	AG6	P	237	239	Right-handed 310
Helix 61	AG7	P	251	261	Right-handed alpha
Helix 62	AG8	P	261	270	Right-handed alpha
Helix 63	AG9	P	281	295	Right-handed alpha
Helix 64	AH1	P	310	313	Right-handed 310
Helix 65	AH2	P	314	328	Right-handed alpha
Helix 66	AH3	P	340	343	Right-handed 310
Helix 67	AH4	P	345	349	Right-handed 310
Helix 68	AH5	P	350	364	Right-handed alpha
Helix 69	AH6	P	377	391	Right-handed alpha
Helix 70	AH7	P	399	413	Right-handed alpha
Helix 71	AH8	P	462	468	Right-handed alpha
Helix 72	AH9	P	488	494	Right-handed alpha
Helix 73	AI1	P	526	531	Right-handed 310
Helix 74	AI2	P	537	548	Right-handed alpha
Helix 75	AI3	P	550	555	Right-handed alpha
Helix 76	AI4	Q	15	30	Right-handed alpha
Helix 77	AI5	Q	69	79	Right-handed alpha
Helix 78	AI6	Q	83	85	Right-handed 310
Helix 79	AI7	Q	90	103	Right-handed alpha
Helix 80	AI8	Q	115	130	Right-handed alpha
Helix 81	AI9	Q	156	170	Right-handed alpha
Helix 82	AJ1	Q	171	173	Right-handed 310
Helix 83	AJ2	Q	194	207	Right-handed alpha
Helix 84	AJ3	Q	223	235	Right-handed alpha
Helix 85	AJ4	Q	237	239	Right-handed 310
Helix 86	AJ5	Q	251	261	Right-handed alpha
Helix 87	AJ6	Q	261	270	Right-handed alpha
Helix 88	AJ7	Q	281	295	Right-handed alpha
Helix 89	AJ8	Q	310	313	Right-handed 310
Helix 90	AJ9	Q	314	328	Right-handed alpha
Helix 91	AK1	Q	340	343	Right-handed 310
Helix 92	AK2	Q	345	349	Right-handed 310
Helix 93	AK3	Q	350	364	Right-handed alpha
Helix 94	AK4	Q	377	391	Right-handed alpha
Helix 95	AK5	Q	399	413	Right-handed alpha
Helix 96	AK6	Q	462	468	Right-handed alpha
Helix 97	AK7	Q	488	494	Right-handed alpha
Helix 98	AK8	Q	526	531	Right-handed 310
Helix 99	AK9	Q	537	548	Right-handed alpha
Helix 100	AL1	Q	550	555	Right-handed alpha

There are 16 sheets in PDB entry 7MGZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	87	89	first strand
Strand 2	F	34	40	parallel
Strand 3	F	142	147	parallel
Strand 4	F	2	8	parallel
Strand 5	F	175	182	parallel
Strand 6	F	213	218	parallel
Strand 7	F	241	245	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	59	60	first strand
Strand 2	F	66	67	anti-parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	331	338	first strand
Strand 2	F	298	305	parallel
Strand 3	F	366	369	parallel
Strand 4	F	395	398	parallel
Strand 5	F	520	523	parallel
Strand 6	F	509	514	anti-parallel
Strand 7	F	497	503	anti-parallel
Strand 8	F	451	457	anti-parallel
Strand 9	F	473	478	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	420	421	first strand
Strand 2	F	431	435	parallel
Strand 3	F	482	484	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	87	89	first strand
Strand 2	O	34	40	parallel
Strand 3	O	142	147	parallel
Strand 4	O	2	8	parallel
Strand 5	O	175	182	parallel
Strand 6	O	213	218	parallel
Strand 7	O	241	245	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	59	60	first strand
Strand 2	O	66	67	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	331	338	first strand
Strand 2	O	298	305	parallel
Strand 3	O	366	369	parallel
Strand 4	O	395	398	parallel
Strand 5	O	520	523	parallel
Strand 6	O	509	514	anti-parallel
Strand 7	O	497	503	anti-parallel
Strand 8	O	451	457	anti-parallel
Strand 9	O	473	478	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	420	421	first strand
Strand 2	O	431	435	parallel
Strand 3	O	482	484	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	87	89	first strand
Strand 2	P	34	40	parallel
Strand 3	P	142	147	parallel
Strand 4	P	2	8	parallel
Strand 5	P	175	182	parallel
Strand 6	P	213	218	parallel
Strand 7	P	241	245	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	59	60	first strand
Strand 2	P	66	67	anti-parallel

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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	331	338	first strand
Strand 2	P	298	305	parallel
Strand 3	P	366	369	parallel
Strand 4	P	395	398	parallel
Strand 5	P	520	523	parallel
Strand 6	P	509	514	anti-parallel
Strand 7	P	497	503	anti-parallel
Strand 8	P	451	457	anti-parallel
Strand 9	P	473	478	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	420	421	first strand
Strand 2	P	431	435	parallel
Strand 3	P	482	484	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	87	89	first strand
Strand 2	Q	34	40	parallel
Strand 3	Q	142	147	parallel
Strand 4	Q	2	8	parallel
Strand 5	Q	175	182	parallel
Strand 6	Q	213	218	parallel
Strand 7	Q	241	245	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	59	60	first strand
Strand 2	Q	66	67	anti-parallel

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There are 9 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	331	338	first strand
Strand 2	Q	298	305	parallel
Strand 3	Q	366	369	parallel
Strand 4	Q	395	398	parallel
Strand 5	Q	520	523	parallel
Strand 6	Q	509	514	anti-parallel
Strand 7	Q	497	503	anti-parallel
Strand 8	Q	451	457	anti-parallel
Strand 9	Q	473	478	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	420	421	first strand
Strand 2	Q	431	435	parallel
Strand 3	Q	482	484	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MGZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MGZ