Analysis of interatomic Contacts of Structural Units in PDB entry:
7MHD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MHD entry

There is 1 chain in PDB entry 7MHD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 216ALA 502
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7MHD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
218 222Right-handed 310
Helix 2
AA2
A
254 256Right-handed 310
Helix 3
AA3
A
257 264Right-handed alpha
Helix 4
AA4
A
281 294Right-handed alpha
Helix 5
AA5
A
308 326Right-handed alpha
Helix 6
AA6
A
340 353Right-handed alpha
Helix 7
AA7
A
359 374Right-handed alpha
Helix 8
AA8
A
379 388Right-handed alpha
Helix 9
AA9
A
392 408Right-handed alpha
Helix 10
AB1
A
412 432Right-handed alpha
Helix 11
AB2
A
463 467Right-handed 310
Helix 12
AB3
A
486 501Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7MHD.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 233first strand
Strand 2
A
268 271anti-parallel
Strand 3
A
244 247parallel
Strand 4
A
303 307parallel
Strand 5
A
333 337parallel
Strand 6
A
443 448parallel
Strand 7
A
472 477parallel
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