Analysis of interatomic Contacts of Structural Units in PDB entry:
7MI3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MI3 entry

There is 1 chain in PDB entry 7MI3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2031GLU 3523
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 56 helices in PDB entry 7MI3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2031 2046Right-handed alpha
Helix 2
AA2
A
2050 2064Right-handed alpha
Helix 3
AA3
A
2079 2096Right-handed alpha
Helix 4
AA4
A
2105 2109Right-handed 310
Helix 5
AA5
A
2110 2115Right-handed alpha
Helix 6
AA6
A
2128 2140Right-handed alpha
Helix 7
AA7
A
2159 2165Right-handed alpha
Helix 8
AA8
A
2166 2171Right-handed alpha
Helix 9
AA9
A
2203 2208Right-handed alpha
Helix 10
AB1
A
2221 2241Right-handed alpha
Helix 11
AB2
A
2242 2258Right-handed alpha
Helix 12
AB3
A
2259 2268Right-handed alpha
Helix 13
AB4
A
2279 2282Right-handed 310
Helix 14
AB5
A
2283 2297Right-handed alpha
Helix 15
AB6
A
2298 2303Right-handed alpha
Helix 16
AB7
A
2306 2328Right-handed alpha
Helix 17
AB8
A
2332 2346Right-handed alpha
Helix 18
AB9
A
2381 2387Right-handed 310
Helix 19
AC1
A
2394 2410Right-handed alpha
Helix 20
AC2
A
2423 2435Right-handed alpha
Helix 21
AC3
A
2450 2462Right-handed alpha
Helix 22
AC4
A
2500 2513Right-handed alpha
Helix 23
AC5
A
2547 2552Right-handed alpha
Helix 24
AC6
A
2564 2579Right-handed alpha
Helix 25
AC7
A
2580 2587Right-handed 310
Helix 26
AC8
A
2588 2607Right-handed alpha
Helix 27
AC9
A
2619 2635Right-handed alpha
Helix 28
AD1
A
2640 2657Right-handed alpha
Helix 29
AD2
A
2658 2660Right-handed 310
Helix 30
AD3
A
2662 2681Right-handed alpha
Helix 31
AD4
A
2708 2727Right-handed alpha
Helix 32
AD5
A
2735 2750Right-handed alpha
Helix 33
AD6
A
2765 2778Right-handed alpha
Helix 34
AD7
A
2791 2809Right-handed alpha
Helix 35
AD8
A
2820 2822Right-handed 310
Helix 36
AD9
A
2824 2837Right-handed alpha
Helix 37
AE1
A
2840 2845Right-handed 310
Helix 38
AE2
A
2846 2863Right-handed alpha
Helix 39
AE3
A
2869 2884Right-handed alpha
Helix 40
AE4
A
2896 2905Right-handed alpha
Helix 41
AE5
A
2905 2910Right-handed alpha
Helix 42
AE6
A
2921 2936Right-handed alpha
Helix 43
AE7
A
2941 2945Right-handed 310
Helix 44
AE8
A
2960 2980Right-handed alpha
Helix 45
AE9
A
2989 3011Right-handed alpha
Helix 46
AF1
A
3318 3334Right-handed alpha
Helix 47
AF2
A
3335 3337Right-handed 310
Helix 48
AF3
A
3338 3356Right-handed alpha
Helix 49
AF4
A
3365 3371Right-handed alpha
Helix 50
AF5
A
3372 3382Right-handed alpha
Helix 51
AF6
A
3387 3400Right-handed alpha
Helix 52
AF7
A
3413 3423Right-handed alpha
Helix 53
AF8
A
3435 3447Right-handed alpha
Helix 54
AF9
A
3459 3461Right-handed 310
Helix 55
AG1
A
3462 3467Right-handed alpha
Helix 56
AG2
A
3506 3511Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 7MI3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2098 2103first strand
Strand 2
A
2148 2153parallel
Strand 3
A
2190 2196parallel
Strand 4
A
2069 2074parallel
Strand 5
A
2211 2215parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2175 2177first strand
Strand 2
A
2183 2185anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2358 2361first strand
Strand 2
A
2368 2371anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2438 2444first strand
Strand 2
A
2481 2487parallel
Strand 3
A
2529 2535parallel
Strand 4
A
2413 2417parallel
Strand 5
A
2554 2558parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2465 2467first strand
Strand 2
A
2471 2475anti-parallel
Strand 3
A
2522 2527anti-parallel
Strand 4
A
2514 2517anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2696 2697first strand
Strand 2
A
2705 2706anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2780 2782first strand
Strand 2
A
2813 2818parallel
Strand 3
A
2885 2891parallel
Strand 4
A
2755 2760parallel
Strand 5
A
2912 2918parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3426 3430first strand
Strand 2
A
3449 3453parallel
Strand 3
A
3493 3498parallel
Strand 4
A
3405 3408parallel
Strand 5
A
3514 3517parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3471 3472first strand
Strand 2
A
3477 3481anti-parallel
Strand 3
A
3484 3487anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il