Analysis of interatomic Contacts of Structural Units in PDB entry:
7MI8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MI8 entry

There is 1 chain in PDB entry 7MI8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1524MET 4092
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 7MI8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1524 1534Right-handed alpha
Helix 2
AA2
A
1535 1539Right-handed 310
Helix 3
AA3
A
1541 1551Right-handed alpha
Helix 4
AA4
A
1558 1567Right-handed alpha
Helix 5
AA5
A
1603 1632Right-handed alpha
Helix 6
AA6
A
1635 1641Right-handed alpha
Helix 7
AA7
A
1644 1667Right-handed alpha
Helix 8
AA8
A
1668 1689Right-handed alpha
Helix 9
AA9
A
1691 1717Right-handed alpha
Helix 10
AB1
A
1720 1731Right-handed alpha
Helix 11
AB2
A
1742 1745Right-handed 310
Helix 12
AB3
A
1772 1788Right-handed alpha
Helix 13
AB4
A
1801 1813Right-handed alpha
Helix 14
AB5
A
1827 1842Right-handed alpha
Helix 15
AB6
A
1854 1875Right-handed alpha
Helix 16
AB7
A
1909 1913Right-handed 310
Helix 17
AB8
A
3617 3639Right-handed alpha
Helix 18
AB9
A
3645 3655Right-handed alpha
Helix 19
AC1
A
3670 3687Right-handed alpha
Helix 20
AC2
A
3688 3690Right-handed 310
Helix 21
AC3
A
3691 3711Right-handed alpha
Helix 22
AC4
A
3712 3727Right-handed alpha
Helix 23
AC5
A
3745 3753Right-handed alpha
Helix 24
AC6
A
3756 3768Right-handed alpha
Helix 25
AC7
A
3773 3781Right-handed alpha
Helix 26
AC8
A
3796 3808Right-handed alpha
Helix 27
AC9
A
3818 3836Right-handed alpha
Helix 28
AD1
A
3847 3854Right-handed alpha
Helix 29
AD2
A
3854 3861Right-handed alpha
Helix 30
AD3
A
3864 3870Right-handed alpha
Helix 31
AD4
A
3885 3892Right-handed alpha
Helix 32
AD5
A
3902 3913Right-handed alpha
Helix 33
AD6
A
3922 3944Right-handed alpha
Helix 34
AD7
A
3957 3974Right-handed alpha
Helix 35
AD8
A
3981 3992Right-handed alpha
Helix 36
AD9
A
4000 4015Right-handed alpha
Helix 37
AE1
A
4037 4051Right-handed alpha
Helix 38
AE2
A
4057 4062Right-handed alpha
Helix 39
AE3
A
4066 4091Right-handed alpha
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There are 5 sheets in PDB entry 7MI8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1569 1574first strand
Strand 2
A
1579 1584anti-parallel
Strand 3
A
1589 1591anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1733 1736first strand
Strand 2
A
1747 1751anti-parallel
Strand 3
A
1754 1757anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1818 1820first strand
Strand 2
A
1844 1847parallel
Strand 3
A
1893 1898parallel
Strand 4
A
1791 1795parallel
Strand 5
A
1916 1920parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1878 1881first strand
Strand 2
A
1884 1887anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3812 3815first strand
Strand 2
A
3839 3842parallel
Strand 3
A
3873 3878parallel
Strand 4
A
3785 3790parallel
Strand 5
A
3893 3895parallel
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