Analysis of interatomic Contacts of Structural Units in PDB entry:
7MIK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MIK entry

There are 4 chains in PDB entry 7MIK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 118	ARG 757
B	ARG 118	ARG 757
C	ARG 118	ARG 757
D	ARG 118	ARG 757

There are128 helices in PDB entry 7MIK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	119	130	Right-handed alpha
Helix 2	AA2	A	131	148	Right-handed alpha
Helix 3	AA3	A	153	158	Right-handed alpha
Helix 4	AA4	A	170	178	Right-handed alpha
Helix 5	AA5	A	182	197	Right-handed alpha
Helix 6	AA6	A	199	205	Right-handed alpha
Helix 7	AA7	A	217	225	Right-handed alpha
Helix 8	AA8	A	227	237	Right-handed alpha
Helix 9	AA9	A	264	271	Right-handed alpha
Helix 10	AB1	A	274	283	Right-handed alpha
Helix 11	AB2	A	298	306	Right-handed alpha
Helix 12	AB3	A	315	329	Right-handed alpha
Helix 13	AB4	A	343	352	Right-handed alpha
Helix 14	AB5	A	353	362	Right-handed alpha
Helix 15	AB6	A	370	374	Right-handed 310
Helix 16	AB7	A	402	409	Right-handed alpha
Helix 17	AB8	A	415	420	Right-handed alpha
Helix 18	AB9	A	422	436	Right-handed alpha
Helix 19	AC1	A	436	461	Right-handed alpha
Helix 20	AC2	A	484	507	Right-handed alpha
Helix 21	AC3	A	512	520	Right-handed alpha
Helix 22	AC4	A	520	543	Right-handed alpha
Helix 23	AC5	A	547	560	Right-handed alpha
Helix 24	AC6	A	563	568	Right-handed 310
Helix 25	AC7	A	569	574	Right-handed alpha
Helix 26	AC8	A	574	586	Right-handed alpha
Helix 27	AC9	A	586	607	Right-handed alpha
Helix 28	AD1	A	624	638	Right-handed alpha
Helix 29	AD2	A	650	666	Right-handed alpha
Helix 30	AD3	A	668	685	Right-handed alpha
Helix 31	AD4	A	687	705	Right-handed alpha
Helix 32	AD5	A	708	713	Right-handed alpha
Helix 33	AD6	B	119	130	Right-handed alpha
Helix 34	AD7	B	131	148	Right-handed alpha
Helix 35	AD8	B	153	158	Right-handed alpha
Helix 36	AD9	B	170	178	Right-handed alpha
Helix 37	AE1	B	182	197	Right-handed alpha
Helix 38	AE2	B	199	205	Right-handed alpha
Helix 39	AE3	B	217	225	Right-handed alpha
Helix 40	AE4	B	227	237	Right-handed alpha
Helix 41	AE5	B	264	271	Right-handed alpha
Helix 42	AE6	B	274	283	Right-handed alpha
Helix 43	AE7	B	298	306	Right-handed alpha
Helix 44	AE8	B	315	329	Right-handed alpha
Helix 45	AE9	B	343	352	Right-handed alpha
Helix 46	AF1	B	353	362	Right-handed alpha
Helix 47	AF2	B	370	374	Right-handed 310
Helix 48	AF3	B	402	409	Right-handed alpha
Helix 49	AF4	B	415	420	Right-handed alpha
Helix 50	AF5	B	422	436	Right-handed alpha
Helix 51	AF6	B	436	461	Right-handed alpha
Helix 52	AF7	B	484	507	Right-handed alpha
Helix 53	AF8	B	512	520	Right-handed alpha
Helix 54	AF9	B	520	543	Right-handed alpha
Helix 55	AG1	B	547	560	Right-handed alpha
Helix 56	AG2	B	563	568	Right-handed 310
Helix 57	AG3	B	569	574	Right-handed alpha
Helix 58	AG4	B	574	586	Right-handed alpha
Helix 59	AG5	B	586	607	Right-handed alpha
Helix 60	AG6	B	624	638	Right-handed alpha
Helix 61	AG7	B	650	666	Right-handed alpha
Helix 62	AG8	B	668	685	Right-handed alpha
Helix 63	AG9	B	687	705	Right-handed alpha
Helix 64	AH1	B	708	713	Right-handed alpha
Helix 65	AH2	C	119	130	Right-handed alpha
Helix 66	AH3	C	131	148	Right-handed alpha
Helix 67	AH4	C	153	158	Right-handed alpha
Helix 68	AH5	C	170	178	Right-handed alpha
Helix 69	AH6	C	182	197	Right-handed alpha
Helix 70	AH7	C	199	205	Right-handed alpha
Helix 71	AH8	C	217	225	Right-handed alpha
Helix 72	AH9	C	227	237	Right-handed alpha
Helix 73	AI1	C	264	271	Right-handed alpha
Helix 74	AI2	C	274	283	Right-handed alpha
Helix 75	AI3	C	298	306	Right-handed alpha
Helix 76	AI4	C	315	329	Right-handed alpha
Helix 77	AI5	C	343	352	Right-handed alpha
Helix 78	AI6	C	353	362	Right-handed alpha
Helix 79	AI7	C	370	374	Right-handed 310
Helix 80	AI8	C	402	409	Right-handed alpha
Helix 81	AI9	C	415	420	Right-handed alpha
Helix 82	AJ1	C	422	436	Right-handed alpha
Helix 83	AJ2	C	436	461	Right-handed alpha
Helix 84	AJ3	C	484	507	Right-handed alpha
Helix 85	AJ4	C	512	520	Right-handed alpha
Helix 86	AJ5	C	520	543	Right-handed alpha
Helix 87	AJ6	C	547	560	Right-handed alpha
Helix 88	AJ7	C	563	568	Right-handed 310
Helix 89	AJ8	C	569	574	Right-handed alpha
Helix 90	AJ9	C	574	586	Right-handed alpha
Helix 91	AK1	C	586	607	Right-handed alpha
Helix 92	AK2	C	624	638	Right-handed alpha
Helix 93	AK3	C	650	666	Right-handed alpha
Helix 94	AK4	C	668	685	Right-handed alpha
Helix 95	AK5	C	687	705	Right-handed alpha
Helix 96	AK6	C	708	713	Right-handed alpha
Helix 97	AK7	D	119	130	Right-handed alpha
Helix 98	AK8	D	131	148	Right-handed alpha
Helix 99	AK9	D	153	158	Right-handed alpha
Helix 100	AL1	D	170	178	Right-handed alpha
Helix 101	AL2	D	182	197	Right-handed alpha
Helix 102	AL3	D	199	205	Right-handed alpha
Helix 103	AL4	D	217	225	Right-handed alpha
Helix 104	AL5	D	227	237	Right-handed alpha
Helix 105	AL6	D	264	271	Right-handed alpha
Helix 106	AL7	D	274	283	Right-handed alpha
Helix 107	AL8	D	298	306	Right-handed alpha
Helix 108	AL9	D	315	329	Right-handed alpha
Helix 109	AM1	D	343	352	Right-handed alpha
Helix 110	AM2	D	353	362	Right-handed alpha
Helix 111	AM3	D	370	374	Right-handed 310
Helix 112	AM4	D	402	409	Right-handed alpha
Helix 113	AM5	D	415	420	Right-handed alpha
Helix 114	AM6	D	422	436	Right-handed alpha
Helix 115	AM7	D	436	461	Right-handed alpha
Helix 116	AM8	D	484	507	Right-handed alpha
Helix 117	AM9	D	512	520	Right-handed alpha
Helix 118	AN1	D	520	543	Right-handed alpha
Helix 119	AN2	D	547	560	Right-handed alpha
Helix 120	AN3	D	563	568	Right-handed 310
Helix 121	AN4	D	569	574	Right-handed alpha
Helix 122	AN5	D	574	586	Right-handed alpha
Helix 123	AN6	D	586	607	Right-handed alpha
Helix 124	AN7	D	624	638	Right-handed alpha
Helix 125	AN8	D	650	666	Right-handed alpha
Helix 126	AN9	D	668	685	Right-handed alpha
Helix 127	AO1	D	687	705	Right-handed alpha
Helix 128	AO2	D	708	713	Right-handed alpha

There are 8 sheets in PDB entry 7MIK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	382	first strand
Strand 2	A	385	391	anti-parallel
Strand 3	A	731	737	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	722	724	first strand
Strand 2	A	727	728	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	382	first strand
Strand 2	B	385	391	anti-parallel
Strand 3	B	731	737	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	722	724	first strand
Strand 2	B	727	728	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	376	382	first strand
Strand 2	C	385	391	anti-parallel
Strand 3	C	731	737	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	722	724	first strand
Strand 2	C	727	728	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	376	382	first strand
Strand 2	D	385	391	anti-parallel
Strand 3	D	731	737	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	722	724	first strand
Strand 2	D	727	728	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MIK

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MIK