Analysis of interatomic Contacts of Structural Units in PDB entry:
7MIM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MIM entry

There are 4 chains in PDB entry 7MIM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 118	ARG 757
B	ARG 118	ARG 757
C	ARG 118	ARG 757
D	ARG 118	ARG 757

There are120 helices in PDB entry 7MIM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	118	130	Right-handed alpha
Helix 2	AA2	A	132	148	Right-handed alpha
Helix 3	AA3	A	153	162	Right-handed alpha
Helix 4	AA4	A	170	178	Right-handed alpha
Helix 5	AA5	A	182	197	Right-handed alpha
Helix 6	AA6	A	199	205	Right-handed alpha
Helix 7	AA7	A	217	225	Right-handed alpha
Helix 8	AA8	A	227	237	Right-handed alpha
Helix 9	AA9	A	264	272	Right-handed alpha
Helix 10	AB1	A	274	283	Right-handed alpha
Helix 11	AB2	A	298	306	Right-handed alpha
Helix 12	AB3	A	315	329	Right-handed alpha
Helix 13	AB4	A	343	352	Right-handed alpha
Helix 14	AB5	A	353	362	Right-handed alpha
Helix 15	AB6	A	367	374	Right-handed 310
Helix 16	AB7	A	402	409	Right-handed alpha
Helix 17	AB8	A	422	436	Right-handed alpha
Helix 18	AB9	A	436	461	Right-handed alpha
Helix 19	AC1	A	484	508	Right-handed alpha
Helix 20	AC2	A	512	517	Right-handed alpha
Helix 21	AC3	A	520	542	Right-handed alpha
Helix 22	AC4	A	547	561	Right-handed alpha
Helix 23	AC5	A	562	564	Right-handed 310
Helix 24	AC6	A	570	586	Right-handed alpha
Helix 25	AC7	A	586	607	Right-handed alpha
Helix 26	AC8	A	624	638	Right-handed alpha
Helix 27	AC9	A	650	666	Right-handed alpha
Helix 28	AD1	A	668	685	Right-handed alpha
Helix 29	AD2	A	687	705	Right-handed alpha
Helix 30	AD3	A	708	713	Right-handed alpha
Helix 31	AD4	B	119	130	Right-handed alpha
Helix 32	AD5	B	132	148	Right-handed alpha
Helix 33	AD6	B	153	162	Right-handed alpha
Helix 34	AD7	B	170	178	Right-handed alpha
Helix 35	AD8	B	182	197	Right-handed alpha
Helix 36	AD9	B	199	205	Right-handed alpha
Helix 37	AE1	B	217	225	Right-handed alpha
Helix 38	AE2	B	227	237	Right-handed alpha
Helix 39	AE3	B	264	272	Right-handed alpha
Helix 40	AE4	B	274	283	Right-handed alpha
Helix 41	AE5	B	298	306	Right-handed alpha
Helix 42	AE6	B	315	329	Right-handed alpha
Helix 43	AE7	B	343	352	Right-handed alpha
Helix 44	AE8	B	353	362	Right-handed alpha
Helix 45	AE9	B	367	374	Right-handed 310
Helix 46	AF1	B	402	409	Right-handed alpha
Helix 47	AF2	B	422	436	Right-handed alpha
Helix 48	AF3	B	436	461	Right-handed alpha
Helix 49	AF4	B	484	508	Right-handed alpha
Helix 50	AF5	B	512	517	Right-handed alpha
Helix 51	AF6	B	520	542	Right-handed alpha
Helix 52	AF7	B	547	561	Right-handed alpha
Helix 53	AF8	B	562	564	Right-handed 310
Helix 54	AF9	B	570	586	Right-handed alpha
Helix 55	AG1	B	586	607	Right-handed alpha
Helix 56	AG2	B	624	638	Right-handed alpha
Helix 57	AG3	B	650	666	Right-handed alpha
Helix 58	AG4	B	668	685	Right-handed alpha
Helix 59	AG5	B	687	705	Right-handed alpha
Helix 60	AG6	B	708	713	Right-handed alpha
Helix 61	AG7	C	119	130	Right-handed alpha
Helix 62	AG8	C	132	148	Right-handed alpha
Helix 63	AG9	C	153	162	Right-handed alpha
Helix 64	AH1	C	170	178	Right-handed alpha
Helix 65	AH2	C	182	197	Right-handed alpha
Helix 66	AH3	C	199	205	Right-handed alpha
Helix 67	AH4	C	217	225	Right-handed alpha
Helix 68	AH5	C	227	237	Right-handed alpha
Helix 69	AH6	C	264	272	Right-handed alpha
Helix 70	AH7	C	274	283	Right-handed alpha
Helix 71	AH8	C	298	306	Right-handed alpha
Helix 72	AH9	C	315	329	Right-handed alpha
Helix 73	AI1	C	343	352	Right-handed alpha
Helix 74	AI2	C	353	362	Right-handed alpha
Helix 75	AI3	C	367	374	Right-handed 310
Helix 76	AI4	C	402	409	Right-handed alpha
Helix 77	AI5	C	422	436	Right-handed alpha
Helix 78	AI6	C	436	461	Right-handed alpha
Helix 79	AI7	C	484	508	Right-handed alpha
Helix 80	AI8	C	512	517	Right-handed alpha
Helix 81	AI9	C	520	542	Right-handed alpha
Helix 82	AJ1	C	547	561	Right-handed alpha
Helix 83	AJ2	C	562	564	Right-handed 310
Helix 84	AJ3	C	570	586	Right-handed alpha
Helix 85	AJ4	C	586	607	Right-handed alpha
Helix 86	AJ5	C	624	638	Right-handed alpha
Helix 87	AJ6	C	650	666	Right-handed alpha
Helix 88	AJ7	C	668	685	Right-handed alpha
Helix 89	AJ8	C	687	705	Right-handed alpha
Helix 90	AJ9	C	708	713	Right-handed alpha
Helix 91	AK1	D	119	130	Right-handed alpha
Helix 92	AK2	D	132	148	Right-handed alpha
Helix 93	AK3	D	153	162	Right-handed alpha
Helix 94	AK4	D	170	178	Right-handed alpha
Helix 95	AK5	D	182	197	Right-handed alpha
Helix 96	AK6	D	199	205	Right-handed alpha
Helix 97	AK7	D	217	225	Right-handed alpha
Helix 98	AK8	D	227	237	Right-handed alpha
Helix 99	AK9	D	264	272	Right-handed alpha
Helix 100	AL1	D	274	283	Right-handed alpha
Helix 101	AL2	D	298	306	Right-handed alpha
Helix 102	AL3	D	315	329	Right-handed alpha
Helix 103	AL4	D	343	352	Right-handed alpha
Helix 104	AL5	D	353	362	Right-handed alpha
Helix 105	AL6	D	367	374	Right-handed 310
Helix 106	AL7	D	402	409	Right-handed alpha
Helix 107	AL8	D	422	436	Right-handed alpha
Helix 108	AL9	D	436	461	Right-handed alpha
Helix 109	AM1	D	484	508	Right-handed alpha
Helix 110	AM2	D	512	517	Right-handed alpha
Helix 111	AM3	D	520	542	Right-handed alpha
Helix 112	AM4	D	547	561	Right-handed alpha
Helix 113	AM5	D	562	564	Right-handed 310
Helix 114	AM6	D	570	586	Right-handed alpha
Helix 115	AM7	D	586	607	Right-handed alpha
Helix 116	AM8	D	624	638	Right-handed alpha
Helix 117	AM9	D	650	666	Right-handed alpha
Helix 118	AN1	D	668	685	Right-handed alpha
Helix 119	AN2	D	687	705	Right-handed alpha
Helix 120	AN3	D	708	713	Right-handed alpha

There are 8 sheets in PDB entry 7MIM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	382	first strand
Strand 2	A	385	391	anti-parallel
Strand 3	A	731	737	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	722	724	first strand
Strand 2	A	727	728	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	382	first strand
Strand 2	B	385	391	anti-parallel
Strand 3	B	731	737	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	722	724	first strand
Strand 2	B	727	728	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	376	382	first strand
Strand 2	C	385	391	anti-parallel
Strand 3	C	731	737	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	722	724	first strand
Strand 2	C	727	728	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	376	382	first strand
Strand 2	D	385	391	anti-parallel
Strand 3	D	731	737	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	722	724	first strand
Strand 2	D	727	728	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MIM

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MIM