Analysis of interatomic Contacts of Structural Units in PDB entry:
7MIR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MIR entry

There are 3 chains in PDB entry 7MIR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 99ALA 848
B
 GLN 4MET 146
C
 GLY 229GLY 1118
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 77 helices in PDB entry 7MIR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
135 158Right-handed alpha
Helix 2
AA2
A
159 163Right-handed 310
Helix 3
AA3
A
164 182Right-handed alpha
Helix 4
AA4
A
184 206Right-handed alpha
Helix 5
AA5
A
206 218Right-handed alpha
Helix 6
AA6
A
222 228Right-handed alpha
Helix 7
AA7
A
230 235Right-handed 310
Helix 8
AA8
A
236 246Right-handed alpha
Helix 9
AA9
A
251 261Right-handed alpha
Helix 10
AB1
A
264 269Right-handed 310
Helix 11
AB2
A
270 281Right-handed alpha
Helix 12
AB3
A
301 311Right-handed alpha
Helix 13
AB4
A
342 344Right-handed 310
Helix 14
AB5
A
374 396Right-handed alpha
Helix 15
AB6
A
412 419Right-handed alpha
Helix 16
AB7
A
424 432Right-handed alpha
Helix 17
AB8
A
446 451Right-handed 310
Helix 18
AB9
A
459 480Right-handed alpha
Helix 19
AC1
A
509 514Right-handed alpha
Helix 20
AC2
A
525 530Right-handed alpha
Helix 21
AC3
A
550 552Right-handed 310
Helix 22
AC4
A
556 563Right-handed alpha
Helix 23
AC5
A
563 569Right-handed alpha
Helix 24
AC6
A
572 576Right-handed 310
Helix 25
AC7
A
587 592Right-handed 310
Helix 26
AC8
A
593 622Right-handed alpha
Helix 27
AC9
A
623 625Right-handed 310
Helix 28
AD1
A
627 655Right-handed alpha
Helix 29
AD2
A
657 669Right-handed alpha
Helix 30
AD3
A
670 682Right-handed alpha
Helix 31
AD4
A
683 689Right-handed 310
Helix 32
AD5
A
690 702Right-handed alpha
Helix 33
AD6
A
738 774Right-handed alpha
Helix 34
AD7
A
780 794Right-handed alpha
Helix 35
AD8
A
800 817Right-handed alpha
Helix 36
AD9
A
826 848Right-handed alpha
Helix 37
AE1
B
6 21Right-handed alpha
Helix 38
AE2
B
32 41Right-handed alpha
Helix 39
AE3
B
45 57Right-handed alpha
Helix 40
AE4
B
66 78Right-handed alpha
Helix 41
AE5
B
83 93Right-handed alpha
Helix 42
AE6
B
102 113Right-handed alpha
Helix 43
AE7
B
122 129Right-handed alpha
Helix 44
AE8
B
138 146Right-handed alpha
Helix 45
AE9
C
237 251Right-handed alpha
Helix 46
AF1
C
278 302Right-handed alpha
Helix 47
AF2
C
314 318Right-handed 310
Helix 48
AF3
C
319 331Right-handed alpha
Helix 49
AF4
C
343 365Right-handed alpha
Helix 50
AF5
C
365 370Right-handed alpha
Helix 51
AF6
C
376 389Right-handed alpha
Helix 52
AF7
C
397 410Right-handed alpha
Helix 53
AF8
C
411 413Right-handed 310
Helix 54
AF9
C
417 431Right-handed alpha
Helix 55
AG1
C
434 452Right-handed alpha
Helix 56
AG2
C
515 521Right-handed alpha
Helix 57
AG3
C
522 527Right-handed alpha
Helix 58
AG4
C
544 553Right-handed alpha
Helix 59
AG5
C
554 563Right-handed alpha
Helix 60
AG6
C
563 586Right-handed alpha
Helix 61
AG7
C
599 615Right-handed alpha
Helix 62
AG8
C
632 643Right-handed alpha
Helix 63
AG9
C
644 651Right-handed alpha
Helix 64
AH1
C
653 668Right-handed alpha
Helix 65
AH2
C
684 696Right-handed alpha
Helix 66
AH3
C
700 714Right-handed alpha
Helix 67
AH4
C
715 727Right-handed alpha
Helix 68
AH5
C
734 756Right-handed alpha
Helix 69
AH6
C
771 788Right-handed alpha
Helix 70
AH7
C
797 809Right-handed alpha
Helix 71
AH8
C
810 814Right-handed 310
Helix 72
AH9
C
824 832Right-handed alpha
Helix 73
AI1
C
901 904Right-handed 310
Helix 74
AI2
C
912 932Right-handed alpha
Helix 75
AI3
C
1067 1075Right-handed alpha
Helix 76
AI4
C
1078 1086Right-handed alpha
Helix 77
AI5
C
1100 1118Right-handed alpha
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There are 12 sheets in PDB entry 7MIR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 109first strand
Strand 2
A
316 320anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 123first strand
Strand 2
A
128 133anti-parallel
Strand 3
A
583 585parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 293first strand
Strand 2
A
298 300anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 350first strand
Strand 2
A
353 357anti-parallel
Strand 3
A
363 368anti-parallel
Strand 4
A
437 445anti-parallel
Strand 5
A
403 411anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
482 483first strand
Strand 2
A
547 548anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 29first strand
Strand 2
B
63 65anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
265 267first strand
Strand 2
C
270 272anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
459 460first strand
Strand 2
C
535 536anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
619 620first strand
Strand 2
C
623 626anti-parallel
Strand 3
C
629 631anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
670 671first strand
Strand 2
C
682 683anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
763 768first strand
Strand 2
C
836 841anti-parallel
Strand 3
C
889 899parallel
Strand 4
C
871 883anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
819 822first strand
Strand 2
C
862 865anti-parallel
Strand 3
C
850 851anti-parallel
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