Analysis of interatomic Contacts of Structural Units in PDB entry:
7MIX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MIX entry

There are 4 chains in PDB entry 7MIX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 86	LEU 1837
B	CYS 1	CYS 25
D	PHE 27	GLY 1076
C	GLU 38	HIS 361

There are110 helices in PDB entry 7MIX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	86	93	Right-handed alpha
Helix 2	AA2	A	94	115	Right-handed alpha
Helix 3	AA3	A	118	122	Right-handed 310
Helix 4	AA4	A	124	132	Right-handed alpha
Helix 5	AA5	A	133	148	Right-handed alpha
Helix 6	AA6	A	160	163	Right-handed 310
Helix 7	AA7	A	164	183	Right-handed alpha
Helix 8	AA8	A	188	193	Right-handed alpha
Helix 9	AA9	A	194	199	Right-handed 310
Helix 10	AB1	A	200	206	Right-handed alpha
Helix 11	AB2	A	206	218	Right-handed alpha
Helix 12	AB3	A	220	245	Right-handed alpha
Helix 13	AB4	A	299	311	Right-handed alpha
Helix 14	AB5	A	315	328	Right-handed alpha
Helix 15	AB6	A	332	344	Right-handed alpha
Helix 16	AB7	A	344	364	Right-handed alpha
Helix 17	AB8	A	365	406	Right-handed alpha
Helix 18	AB9	A	465	476	Right-handed alpha
Helix 19	AC1	A	481	500	Right-handed alpha
Helix 20	AC2	A	507	537	Right-handed alpha
Helix 21	AC3	A	537	544	Right-handed alpha
Helix 22	AC4	A	544	567	Right-handed alpha
Helix 23	AC5	A	574	589	Right-handed 310
Helix 24	AC6	A	591	605	Right-handed alpha
Helix 25	AC7	A	605	632	Right-handed alpha
Helix 26	AC8	A	648	662	Right-handed alpha
Helix 27	AC9	A	664	678	Right-handed alpha
Helix 28	AD1	A	682	684	Right-handed 310
Helix 29	AD2	A	685	740	Right-handed alpha
Helix 30	AD3	A	747	756	Right-handed alpha
Helix 31	AD4	A	766	786	Right-handed alpha
Helix 32	AD5	A	1140	1149	Right-handed alpha
Helix 33	AD6	A	1152	1169	Right-handed alpha
Helix 34	AD7	A	1177	1200	Right-handed alpha
Helix 35	AD8	A	1219	1238	Right-handed alpha
Helix 36	AD9	A	1243	1253	Right-handed alpha
Helix 37	AE1	A	1254	1259	Right-handed 310
Helix 38	AE2	A	1260	1265	Right-handed alpha
Helix 39	AE3	A	1265	1281	Right-handed alpha
Helix 40	AE4	A	1282	1305	Right-handed alpha
Helix 41	AE5	A	1350	1364	Right-handed alpha
Helix 42	AE6	A	1366	1377	Right-handed alpha
Helix 43	AE7	A	1392	1403	Right-handed alpha
Helix 44	AE8	A	1405	1418	Right-handed alpha
Helix 45	AE9	A	1435	1446	Right-handed alpha
Helix 46	AF1	A	1460	1470	Right-handed alpha
Helix 47	AF2	A	1470	1489	Right-handed alpha
Helix 48	AF3	A	1496	1526	Right-handed alpha
Helix 49	AF4	A	1526	1531	Right-handed alpha
Helix 50	AF5	A	1535	1555	Right-handed alpha
Helix 51	AF6	A	1565	1581	Right-handed 310
Helix 52	AF7	A	1582	1598	Right-handed alpha
Helix 53	AF8	A	1599	1622	Right-handed alpha
Helix 54	AF9	A	1640	1654	Right-handed alpha
Helix 55	AG1	A	1656	1664	Right-handed alpha
Helix 56	AG2	A	1683	1708	Right-handed alpha
Helix 57	AG3	A	1710	1715	Right-handed alpha
Helix 58	AG4	A	1724	1734	Right-handed alpha
Helix 59	AG5	A	1746	1756	Right-handed alpha
Helix 60	AG6	A	1766	1776	Right-handed alpha
Helix 61	AG7	A	1780	1784	Right-handed 310
Helix 62	AG8	A	1794	1802	Right-handed alpha
Helix 63	AG9	A	1806	1811	Right-handed alpha
Helix 64	AH1	A	1813	1825	Right-handed alpha
Helix 65	AH2	A	1832	1837	Right-handed alpha
Helix 66	AH3	B	9	13	Right-handed 310
Helix 67	AH4	D	29	53	Right-handed alpha
Helix 68	AH5	D	53	65	Right-handed alpha
Helix 69	AH6	D	74	110	Right-handed alpha
Helix 70	AH7	D	176	187	Right-handed alpha
Helix 71	AH8	D	189	200	Right-handed alpha
Helix 72	AH9	D	237	240	Right-handed 310
Helix 73	AI1	D	241	249	Right-handed alpha
Helix 74	AI2	D	261	265	Right-handed 310
Helix 75	AI3	D	266	281	Right-handed alpha
Helix 76	AI4	D	311	323	Right-handed alpha
Helix 77	AI5	D	332	344	Right-handed alpha
Helix 78	AI6	D	369	377	Right-handed alpha
Helix 79	AI7	D	396	405	Right-handed alpha
Helix 80	AI8	D	415	417	Right-handed 310
Helix 81	AI9	D	418	423	Right-handed alpha
Helix 82	AJ1	D	425	431	Right-handed alpha
Helix 83	AJ2	D	431	438	Right-handed alpha
Helix 84	AJ3	D	439	442	Right-handed 310
Helix 85	AJ4	D	494	499	Right-handed alpha
Helix 86	AJ5	D	560	565	Right-handed alpha
Helix 87	AJ6	D	568	581	Right-handed alpha
Helix 88	AJ7	D	637	646	Right-handed alpha
Helix 89	AJ8	D	647	648	Right-handed 310
Helix 90	AJ9	D	649	653	Right-handed 310
Helix 91	AK1	D	677	689	Right-handed alpha
Helix 92	AK2	D	698	719	Right-handed alpha
Helix 93	AK3	D	745	749	Right-handed 310
Helix 94	AK4	D	757	760	Right-handed 310
Helix 95	AK5	D	761	770	Right-handed alpha
Helix 96	AK6	D	817	827	Right-handed alpha
Helix 97	AK7	D	874	879	Right-handed alpha
Helix 98	AK8	D	879	889	Right-handed alpha
Helix 99	AK9	D	1042	1047	Right-handed alpha
Helix 100	AL1	C	39	56	Right-handed alpha
Helix 101	AL2	C	120	132	Right-handed alpha
Helix 102	AL3	C	155	159	Right-handed 310
Helix 103	AL4	C	190	208	Right-handed alpha
Helix 104	AL5	C	246	263	Right-handed alpha
Helix 105	AL6	C	276	281	Right-handed 310
Helix 106	AL7	C	296	306	Right-handed alpha
Helix 107	AL8	C	308	314	Right-handed alpha
Helix 108	AL9	C	314	328	Right-handed alpha
Helix 109	AM1	C	329	333	Right-handed 310
Helix 110	AM2	C	341	360	Right-handed alpha

There are 16 sheets in PDB entry 7MIX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	252	254	first strand
Strand 2	A	282	284	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1309	1311	first strand
Strand 2	A	1341	1343	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1325	1330	first strand
Strand 2	A	1333	1338	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	72	first strand
Strand 2	D	629	633	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	142	144	first strand
Strand 2	D	122	126	parallel
Strand 3	D	165	167	parallel
Strand 4	D	215	218	anti-parallel
Strand 5	D	206	210	anti-parallel
Strand 6	D	484	493	anti-parallel
Strand 7	D	458	467	anti-parallel
Strand 8	D	445	446	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	142	144	first strand
Strand 2	D	122	126	parallel
Strand 3	D	165	167	parallel
Strand 4	D	215	218	anti-parallel
Strand 5	D	206	210	anti-parallel
Strand 6	D	484	493	anti-parallel
Strand 7	D	458	467	anti-parallel
Strand 8	D	450	451	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	150	151	first strand
Strand 2	D	158	159	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	298	300	first strand
Strand 2	D	290	294	anti-parallel
Strand 3	D	255	259	parallel
Strand 4	D	357	362	parallel
Strand 5	D	383	389	parallel
Strand 6	D	409	413	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	521	523	first strand
Strand 2	D	511	515	anti-parallel
Strand 3	D	618	624	anti-parallel
Strand 4	D	600	611	anti-parallel
Strand 5	D	584	593	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	538	539	first strand
Strand 2	D	907	908	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	658	661	first strand
Strand 2	D	740	743	anti-parallel
Strand 3	D	731	736	anti-parallel
Strand 4	D	810	816	anti-parallel
Strand 5	D	792	797	anti-parallel
Strand 6	D	774	776	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	800	801	first strand
Strand 2	D	806	807	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	859	861	first strand
Strand 2	D	848	854	anti-parallel
Strand 3	D	1013	1019	anti-parallel
Strand 4	D	1001	1007	anti-parallel
Strand 5	D	989	994	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	892	904	first strand
Strand 2	D	972	983	anti-parallel
Strand 3	D	1036	1038	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	65	first strand
Strand 2	C	92	98	anti-parallel
Strand 3	C	103	108	anti-parallel
Strand 4	C	115	119	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	212	215	first strand
Strand 2	C	266	269	parallel
Strand 3	C	180	183	parallel
Strand 4	C	288	292	parallel
Strand 5	C	335	337	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MIX

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MIX