Analysis of interatomic Contacts of Structural Units in PDB entry:
7MJO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MJO entry

There are 6 chains in PDB entry 7MJO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 24	THR 368
B	ARG 30	ILE 366
C	LEU 31	GLN 367
D	ARG 30	ILE 366
E	MET 1	ALA 1543
G	MET 1	PRO 205

There are101 helices in PDB entry 7MJO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	25	31	Right-handed alpha
Helix 2	AA2	A	58	66	Right-handed alpha
Helix 3	AA3	A	68	98	Right-handed alpha
Helix 4	AA4	A	100	106	Right-handed alpha
Helix 5	AA5	A	126	139	Right-handed alpha
Helix 6	AA6	A	152	183	Right-handed alpha
Helix 7	AA7	A	282	287	Right-handed 310
Helix 8	AA8	A	314	318	Right-handed 310
Helix 9	AA9	A	353	358	Right-handed alpha
Helix 10	AB1	B	56	66	Right-handed alpha
Helix 11	AB2	B	68	98	Right-handed alpha
Helix 12	AB3	B	100	105	Right-handed alpha
Helix 13	AB4	B	111	116	Right-handed alpha
Helix 14	AB5	B	126	139	Right-handed alpha
Helix 15	AB6	B	152	184	Right-handed alpha
Helix 16	AB7	B	281	286	Right-handed alpha
Helix 17	AB8	B	314	316	Right-handed 310
Helix 18	AB9	B	355	361	Right-handed alpha
Helix 19	AC1	C	57	66	Right-handed alpha
Helix 20	AC2	C	68	98	Right-handed alpha
Helix 21	AC3	C	100	107	Right-handed alpha
Helix 22	AC4	C	127	139	Right-handed alpha
Helix 23	AC5	C	152	182	Right-handed alpha
Helix 24	AC6	C	275	280	Right-handed 310
Helix 25	AC7	C	314	318	Right-handed 310
Helix 26	AC8	C	356	361	Right-handed alpha
Helix 27	AC9	D	58	66	Right-handed alpha
Helix 28	AD1	D	70	73	Right-handed 310
Helix 29	AD2	D	74	98	Right-handed alpha
Helix 30	AD3	D	99	106	Right-handed alpha
Helix 31	AD4	D	126	139	Right-handed alpha
Helix 32	AD5	D	152	183	Right-handed alpha
Helix 33	AD6	D	275	280	Right-handed 310
Helix 34	AD7	D	283	288	Right-handed 310
Helix 35	AD8	D	316	318	Right-handed 310
Helix 36	AD9	D	340	342	Right-handed 310
Helix 37	AE1	D	354	359	Right-handed alpha
Helix 38	AE2	D	361	366	Right-handed alpha
Helix 39	AE3	E	22	48	Right-handed alpha
Helix 40	AE4	E	56	61	Right-handed alpha
Helix 41	AE5	E	62	64	Right-handed 310
Helix 42	AE6	E	68	97	Right-handed alpha
Helix 43	AE7	E	101	104	Right-handed 310
Helix 44	AE8	E	105	128	Right-handed alpha
Helix 45	AE9	E	130	133	Right-handed 310
Helix 46	AF1	E	134	157	Right-handed alpha
Helix 47	AF2	E	164	196	Right-handed alpha
Helix 48	AF3	E	218	225	Right-handed alpha
Helix 49	AF4	E	228	237	Right-handed alpha
Helix 50	AF5	E	251	256	Right-handed alpha
Helix 51	AF6	E	257	276	Right-handed alpha
Helix 52	AF7	E	297	324	Right-handed alpha
Helix 53	AF8	E	347	394	Right-handed alpha
Helix 54	AF9	E	400	405	Right-handed 310
Helix 55	AG1	E	408	413	Right-handed alpha
Helix 56	AG2	E	417	434	Right-handed alpha
Helix 57	AG3	E	434	450	Right-handed alpha
Helix 58	AG4	E	453	497	Right-handed alpha
Helix 59	AG5	E	498	503	Right-handed alpha
Helix 60	AG6	E	509	511	Right-handed 310
Helix 61	AG7	E	512	556	Right-handed alpha
Helix 62	AG8	E	564	579	Right-handed alpha
Helix 63	AG9	E	580	607	Right-handed alpha
Helix 64	AH1	E	706	715	Right-handed alpha
Helix 65	AH2	E	761	768	Right-handed alpha
Helix 66	AH3	E	773	784	Right-handed alpha
Helix 67	AH4	E	786	793	Right-handed alpha
Helix 68	AH5	E	795	799	Right-handed 310
Helix 69	AH6	E	809	823	Right-handed alpha
Helix 70	AH7	E	843	855	Right-handed alpha
Helix 71	AH8	E	893	899	Right-handed alpha
Helix 72	AH9	E	900	910	Right-handed alpha
Helix 73	AI1	E	962	966	Right-handed 310
Helix 74	AI2	E	974	985	Right-handed alpha
Helix 75	AI3	E	992	1015	Right-handed alpha
Helix 76	AI4	E	1029	1034	Right-handed 310
Helix 77	AI5	E	1035	1037	Right-handed 310
Helix 78	AI6	E	1038	1072	Right-handed alpha
Helix 79	AI7	E	1076	1083	Right-handed alpha
Helix 80	AI8	E	1084	1102	Right-handed alpha
Helix 81	AI9	E	1102	1128	Right-handed alpha
Helix 82	AJ1	E	1128	1135	Right-handed alpha
Helix 83	AJ2	E	1136	1164	Right-handed alpha
Helix 84	AJ3	E	1164	1177	Right-handed alpha
Helix 85	AJ4	E	1189	1238	Right-handed alpha
Helix 86	AJ5	E	1240	1280	Right-handed alpha
Helix 87	AJ6	E	1343	1354	Right-handed alpha
Helix 88	AJ7	E	1380	1385	Right-handed 310
Helix 89	AJ8	E	1423	1428	Right-handed alpha
Helix 90	AJ9	E	1453	1458	Right-handed alpha
Helix 91	AK1	E	1475	1491	Right-handed alpha
Helix 92	AK2	E	1502	1507	Right-handed alpha
Helix 93	AK3	E	1526	1533	Right-handed alpha
Helix 94	AK4	E	1536	1541	Right-handed alpha
Helix 95	AK5	G	22	47	Right-handed alpha
Helix 96	AK6	G	68	95	Right-handed alpha
Helix 97	AK7	G	101	104	Right-handed 310
Helix 98	AK8	G	105	127	Right-handed alpha
Helix 99	AK9	G	130	133	Right-handed 310
Helix 100	AL1	G	134	159	Right-handed alpha
Helix 101	AL2	G	164	187	Right-handed alpha

There are 20 sheets in PDB entry 7MJO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	191	193	first strand
Strand 2	A	211	214	anti-parallel
Strand 3	A	265	266	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	198	202	first strand
Strand 2	A	205	209	anti-parallel
Strand 3	A	269	270	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	244	248	first strand
Strand 2	A	220	231	anti-parallel
Strand 3	A	291	300	anti-parallel
Strand 4	A	306	313	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	323	324	first strand
Strand 2	A	345	346	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	328	330	first strand
Strand 2	A	335	337	anti-parallel
Strand 3	D	46	47	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	270	first strand
Strand 2	B	205	212	anti-parallel
Strand 3	B	197	202	anti-parallel
Strand 4	B	318	320	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	246	248	first strand
Strand 2	B	221	229	anti-parallel
Strand 3	B	292	300	anti-parallel
Strand 4	B	305	313	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	233	235	first strand
Strand 2	B	239	241	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	48	first strand
Strand 2	D	335	338	parallel
Strand 3	D	328	330	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	210	212	first strand
Strand 2	C	265	267	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	245	248	first strand
Strand 2	C	220	230	anti-parallel
Strand 3	C	291	300	anti-parallel
Strand 4	C	306	313	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	233	234	first strand
Strand 2	C	240	241	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	322	323	first strand
Strand 2	C	346	347	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	37	38	first strand
Strand 2	D	41	43	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	201	202	first strand
Strand 2	D	205	206	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	240	248	first strand
Strand 2	D	220	234	anti-parallel
Strand 3	D	291	300	anti-parallel
Strand 4	D	306	314	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	323	324	first strand
Strand 2	D	345	346	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	669	670	first strand
Strand 2	E	725	726	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	748	750	first strand
Strand 2	E	828	830	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1513	1516	first strand
Strand 2	E	1519	1523	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MJO

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MJO