Analysis of interatomic Contacts of Structural Units in PDB entry:
7MJR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MJR entry

There is 1 chain in PDB entry 7MJR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 10GLN 934
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7MJR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 48Right-handed 310
Helix 2
AA2
A
50 54Right-handed 310
Helix 3
AA3
A
77 79Right-handed 310
Helix 4
AA4
A
139 141Right-handed 310
Helix 5
AA5
A
194 201Right-handed alpha
Helix 6
AA6
A
214 219Right-handed alpha
Helix 7
AA7
A
239 245Right-handed alpha
Helix 8
AA8
A
253 258Right-handed 310
Helix 9
AA9
A
300 304Right-handed 310
Helix 10
AB1
A
342 348Right-handed alpha
Helix 11
AB2
A
419 423Right-handed alpha
Helix 12
AB3
A
434 442Right-handed alpha
Helix 13
AB4
A
473 483Right-handed alpha
Helix 14
AB5
A
518 528Right-handed alpha
Helix 15
AB6
A
558 569Right-handed alpha
Helix 16
AB7
A
576 580Right-handed 310
Helix 17
AB8
A
698 703Right-handed 310
Helix 18
AB9
A
730 735Right-handed alpha
Helix 19
AC1
A
820 831Right-handed alpha
Helix 20
AC2
A
856 861Right-handed alpha
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There are 17 sheets in PDB entry 7MJR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 92first strand
Strand 2
A
81 85anti-parallel
Strand 3
A
106 115anti-parallel
Strand 4
A
56 65anti-parallel
Strand 5
A
143 144anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 92first strand
Strand 2
A
81 85anti-parallel
Strand 3
A
106 115anti-parallel
Strand 4
A
56 65anti-parallel
Strand 5
A
17 22anti-parallel
Strand 6
A
30 37anti-parallel
Strand 7
A
208 211anti-parallel
Strand 8
A
202 204anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 41first strand
Strand 2
A
124 127anti-parallel
Strand 3
A
74 75anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 71first strand
Strand 2
A
100 102anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 393first strand
Strand 2
A
377 382anti-parallel
Strand 3
A
447 451anti-parallel
Strand 4
A
330 335anti-parallel
Strand 5
A
289 298anti-parallel
Strand 6
A
267 277anti-parallel
Strand 7
A
354 365anti-parallel
Strand 8
A
417 418anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 409first strand
Strand 2
A
354 365anti-parallel
Strand 3
A
431 433anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
402 403first strand
Strand 2
A
371 372anti-parallel
Strand 3
A
457 461anti-parallel
Strand 4
A
467 472anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
498 503first strand
Strand 2
A
484 490anti-parallel
Strand 3
A
587 591parallel
Strand 4
A
554 557anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
537 538first strand
Strand 2
A
546 547anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
595 597first strand
Strand 2
A
715 724anti-parallel
Strand 3
A
623 624anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
595 597first strand
Strand 2
A
715 724anti-parallel
Strand 3
A
643 651anti-parallel
Strand 4
A
687 694anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 607first strand
Strand 2
A
629 632anti-parallel
Strand 3
A
704 711anti-parallel
Strand 4
A
659 666anti-parallel
Strand 5
A
674 679anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
736 737first strand
Strand 2
A
750 756anti-parallel
Strand 3
A
787 791anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
771 772first strand
Strand 2
A
763 768anti-parallel
Strand 3
A
776 777anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
771 772first strand
Strand 2
A
763 768anti-parallel
Strand 3
A
800 805anti-parallel
Strand 4
A
815 819anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
834 840first strand
Strand 2
A
843 852anti-parallel
Strand 3
A
888 891anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
876 879first strand
Strand 2
A
865 870anti-parallel
Strand 3
A
906 909anti-parallel
Strand 4
A
921 924anti-parallel
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