Analysis of interatomic Contacts of Structural Units in PDB entry:
7MK2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MK2 entry

There are 2 chains in PDB entry 7MK2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 40ASP 402
B
 GLY 40ASP 402
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 7MK2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 59Right-handed alpha
Helix 2
AA2
A
80 88Right-handed alpha
Helix 3
AA3
A
88 99Right-handed alpha
Helix 4
AA4
A
114 118Right-handed alpha
Helix 5
AA5
A
125 138Right-handed alpha
Helix 6
AA6
A
160 178Right-handed alpha
Helix 7
AA7
A
179 194Right-handed alpha
Helix 8
AA8
A
195 197Right-handed 310
Helix 9
AA9
A
198 212Right-handed alpha
Helix 10
AB1
A
213 215Right-handed 310
Helix 11
AB2
A
216 230Right-handed alpha
Helix 12
AB3
A
233 240Right-handed alpha
Helix 13
AB4
A
242 256Right-handed alpha
Helix 14
AB5
A
264 275Right-handed alpha
Helix 15
AB6
A
279 287Right-handed alpha
Helix 16
AB7
A
292 297Right-handed alpha
Helix 17
AB8
A
297 306Right-handed alpha
Helix 18
AB9
A
307 316Right-handed alpha
Helix 19
AC1
A
331 340Right-handed alpha
Helix 20
AC2
A
341 352Right-handed alpha
Helix 21
AC3
A
364 372Right-handed alpha
Helix 22
AC4
A
389 400Right-handed alpha
Helix 23
AC5
B
41 59Right-handed alpha
Helix 24
AC6
B
80 87Right-handed alpha
Helix 25
AC7
B
88 101Right-handed alpha
Helix 26
AC8
B
125 138Right-handed alpha
Helix 27
AC9
B
160 178Right-handed alpha
Helix 28
AD1
B
179 194Right-handed alpha
Helix 29
AD2
B
198 212Right-handed alpha
Helix 30
AD3
B
213 215Right-handed 310
Helix 31
AD4
B
216 229Right-handed alpha
Helix 32
AD5
B
233 240Right-handed alpha
Helix 33
AD6
B
242 254Right-handed alpha
Helix 34
AD7
B
265 275Right-handed alpha
Helix 35
AD8
B
279 290Right-handed alpha
Helix 36
AD9
B
292 296Right-handed 310
Helix 37
AE1
B
297 305Right-handed alpha
Helix 38
AE2
B
307 317Right-handed alpha
Helix 39
AE3
B
331 340Right-handed alpha
Helix 40
AE4
B
341 351Right-handed alpha
Helix 41
AE5
B
364 373Right-handed alpha
Helix 42
AE6
B
389 398Right-handed alpha
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There are 2 sheets in PDB entry 7MK2. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 79first strand
Strand 2
A
67 70anti-parallel
Strand 3
A
110 113parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 79first strand
Strand 2
B
67 70anti-parallel
Strand 3
B
111 113parallel
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