Analysis of interatomic Contacts of Structural Units in PDB entry:
7MK3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MK3 entry

There are 2 chains in PDB entry 7MK3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 39ARG 404
B
 THR 39GLU 405
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 7MK3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 59Right-handed alpha
Helix 2
AA2
A
60 64Right-handed 310
Helix 3
AA3
A
80 88Right-handed alpha
Helix 4
AA4
A
88 99Right-handed alpha
Helix 5
AA5
A
100 102Right-handed 310
Helix 6
AA6
A
114 118Right-handed alpha
Helix 7
AA7
A
124 138Right-handed alpha
Helix 8
AA8
A
160 177Right-handed alpha
Helix 9
AA9
A
179 194Right-handed alpha
Helix 10
AB1
A
198 212Right-handed alpha
Helix 11
AB2
A
213 215Right-handed 310
Helix 12
AB3
A
216 230Right-handed alpha
Helix 13
AB4
A
233 241Right-handed alpha
Helix 14
AB5
A
242 256Right-handed alpha
Helix 15
AB6
A
264 276Right-handed alpha
Helix 16
AB7
A
278 288Right-handed alpha
Helix 17
AB8
A
292 297Right-handed alpha
Helix 18
AB9
A
297 305Right-handed alpha
Helix 19
AC1
A
307 316Right-handed alpha
Helix 20
AC2
A
331 340Right-handed alpha
Helix 21
AC3
A
341 350Right-handed alpha
Helix 22
AC4
A
364 373Right-handed alpha
Helix 23
AC5
A
374 379Right-handed 310
Helix 24
AC6
A
389 404Right-handed alpha
Helix 25
AC7
B
42 59Right-handed alpha
Helix 26
AC8
B
60 64Right-handed 310
Helix 27
AC9
B
80 88Right-handed alpha
Helix 28
AD1
B
88 102Right-handed alpha
Helix 29
AD2
B
114 118Right-handed alpha
Helix 30
AD3
B
124 138Right-handed alpha
Helix 31
AD4
B
160 177Right-handed alpha
Helix 32
AD5
B
179 194Right-handed alpha
Helix 33
AD6
B
195 197Right-handed 310
Helix 34
AD7
B
198 212Right-handed alpha
Helix 35
AD8
B
213 215Right-handed 310
Helix 36
AD9
B
216 230Right-handed alpha
Helix 37
AE1
B
233 241Right-handed alpha
Helix 38
AE2
B
242 256Right-handed alpha
Helix 39
AE3
B
264 276Right-handed alpha
Helix 40
AE4
B
278 287Right-handed alpha
Helix 41
AE5
B
292 297Right-handed alpha
Helix 42
AE6
B
297 306Right-handed alpha
Helix 43
AE7
B
307 317Right-handed alpha
Helix 44
AE8
B
331 340Right-handed alpha
Helix 45
AE9
B
341 351Right-handed alpha
Helix 46
AF1
B
364 373Right-handed alpha
Helix 47
AF2
B
374 379Right-handed 310
Helix 48
AF3
B
389 403Right-handed alpha
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There are 2 sheets in PDB entry 7MK3. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 79first strand
Strand 2
A
67 70anti-parallel
Strand 3
A
111 113parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 79first strand
Strand 2
B
67 70anti-parallel
Strand 3
B
111 113parallel
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