Analysis of interatomic Contacts of Structural Units in PDB entry:
7MK7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MK7 entry

There are 2 chains in PDB entry 7MK7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 83ALA 475
B
 THR 85ALA 475
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 7MK7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
87 100Right-handed alpha
Helix 2
AA2
A
106 108Right-handed 310
Helix 3
AA3
A
109 123Right-handed alpha
Helix 4
AA4
A
124 127Right-handed 310
Helix 5
AA5
A
140 156Right-handed alpha
Helix 6
AA6
A
166 175Right-handed alpha
Helix 7
AA7
A
190 197Right-handed alpha
Helix 8
AA8
A
206 211Right-handed alpha
Helix 9
AA9
A
214 219Right-handed alpha
Helix 10
AB1
A
255 266Right-handed alpha
Helix 11
AB2
A
277 286Right-handed alpha
Helix 12
AB3
A
313 325Right-handed alpha
Helix 13
AB4
A
333 343Right-handed alpha
Helix 14
AB5
A
352 354Right-handed 310
Helix 15
AB6
A
355 363Right-handed alpha
Helix 16
AB7
A
396 407Right-handed alpha
Helix 17
AB8
A
410 421Right-handed alpha
Helix 18
AB9
A
428 436Right-handed alpha
Helix 19
AC1
A
438 450Right-handed alpha
Helix 20
AC2
A
459 474Right-handed alpha
Helix 21
AC3
B
87 100Right-handed alpha
Helix 22
AC4
B
106 108Right-handed 310
Helix 23
AC5
B
109 123Right-handed alpha
Helix 24
AC6
B
124 127Right-handed 310
Helix 25
AC7
B
140 156Right-handed alpha
Helix 26
AC8
B
166 175Right-handed alpha
Helix 27
AC9
B
190 197Right-handed alpha
Helix 28
AD1
B
206 211Right-handed alpha
Helix 29
AD2
B
214 221Right-handed alpha
Helix 30
AD3
B
252 254Right-handed 310
Helix 31
AD4
B
255 264Right-handed alpha
Helix 32
AD5
B
277 286Right-handed alpha
Helix 33
AD6
B
313 325Right-handed alpha
Helix 34
AD7
B
333 343Right-handed alpha
Helix 35
AD8
B
352 354Right-handed 310
Helix 36
AD9
B
355 360Right-handed alpha
Helix 37
AE1
B
396 407Right-handed alpha
Helix 38
AE2
B
410 421Right-handed alpha
Helix 39
AE3
B
428 436Right-handed alpha
Helix 40
AE4
B
438 451Right-handed alpha
Helix 41
AE5
B
459 475Right-handed alpha
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There are 9 sheets in PDB entry 7MK7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 162first strand
Strand 2
A
130 134parallel
Strand 3
A
183 187parallel
Strand 4
A
382 390anti-parallel
Strand 5
A
230 235anti-parallel
Strand 6
A
425 426anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 162first strand
Strand 2
A
130 134parallel
Strand 3
A
183 187parallel
Strand 4
A
382 390anti-parallel
Strand 5
A
452 453parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 223first strand
Strand 2
A
226 227anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 351first strand
Strand 2
A
238 242anti-parallel
Strand 3
A
366 369anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 162first strand
Strand 2
B
130 134parallel
Strand 3
B
183 187parallel
Strand 4
B
382 390anti-parallel
Strand 5
B
230 236anti-parallel
Strand 6
B
425 426anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 162first strand
Strand 2
B
130 134parallel
Strand 3
B
183 187parallel
Strand 4
B
382 390anti-parallel
Strand 5
B
452 453parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
222 223first strand
Strand 2
B
226 227anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
269 271first strand
Strand 2
B
346 351parallel
Strand 3
B
238 242anti-parallel
Strand 4
B
366 369anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
373 374first strand
Strand 2
B
377 378anti-parallel
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