Analysis of interatomic Contacts of Structural Units in PDB entry:
7MKE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MKE entry

There are 8 chains in PDB entry 7MKE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	VAL 5	VAL 237
H	GLY 3	ASP 233
I	VAL 2	ASP 1341
J	GLU 16	ALA 1375
K	ALA 2	LEU 80
L	ILE 91	LEU 611
P	T 24	G 73
Q	C 18	A 67

There are133 helices in PDB entry 7MKE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	34	50	Right-handed alpha
Helix 2	AA2	G	77	87	Right-handed alpha
Helix 3	AA3	G	113	115	Right-handed 310
Helix 4	AA4	G	154	159	Right-handed alpha
Helix 5	AA5	G	212	228	Right-handed alpha
Helix 6	AA6	G	228	233	Right-handed alpha
Helix 7	AA7	H	35	49	Right-handed alpha
Helix 8	AA8	H	77	87	Right-handed alpha
Helix 9	AA9	H	113	115	Right-handed 310
Helix 10	AB1	H	154	158	Right-handed 310
Helix 11	AB2	H	212	227	Right-handed alpha
Helix 12	AB3	I	28	39	Right-handed alpha
Helix 13	AB4	I	48	57	Right-handed alpha
Helix 14	AB5	I	81	89	Right-handed alpha
Helix 15	AB6	I	206	213	Right-handed alpha
Helix 16	AB7	I	216	225	Right-handed alpha
Helix 17	AB8	I	242	247	Right-handed 310
Helix 18	AB9	I	270	280	Right-handed alpha
Helix 19	AC1	I	288	293	Right-handed alpha
Helix 20	AC2	I	318	328	Right-handed alpha
Helix 21	AC3	I	345	354	Right-handed alpha
Helix 22	AC4	I	358	371	Right-handed alpha
Helix 23	AC5	I	377	389	Right-handed alpha
Helix 24	AC6	I	398	409	Right-handed alpha
Helix 25	AC7	I	421	438	Right-handed alpha
Helix 26	AC8	I	455	481	Right-handed alpha
Helix 27	AC9	I	495	508	Right-handed alpha
Helix 28	AD1	I	519	528	Right-handed alpha
Helix 29	AD2	I	539	543	Right-handed 310
Helix 30	AD3	I	544	549	Right-handed alpha
Helix 31	AD4	I	551	555	Right-handed 310
Helix 32	AD5	I	609	614	Right-handed alpha
Helix 33	AD6	I	663	668	Right-handed 310
Helix 34	AD7	I	670	674	Right-handed 310
Helix 35	AD8	I	675	686	Right-handed alpha
Helix 36	AD9	I	687	689	Right-handed 310
Helix 37	AE1	I	704	712	Right-handed alpha
Helix 38	AE2	I	820	825	Right-handed alpha
Helix 39	AE3	I	860	865	Right-handed 310
Helix 40	AE4	I	898	907	Right-handed alpha
Helix 41	AE5	I	942	981	Right-handed alpha
Helix 42	AE6	I	996	1000	Right-handed 310
Helix 43	AE7	I	1007	1038	Right-handed alpha
Helix 44	AE8	I	1099	1101	Right-handed 310
Helix 45	AE9	I	1102	1107	Right-handed alpha
Helix 46	AF1	I	1109	1134	Right-handed alpha
Helix 47	AF2	I	1137	1149	Right-handed alpha
Helix 48	AF3	I	1167	1177	Right-handed alpha
Helix 49	AF4	I	1191	1202	Right-handed alpha
Helix 50	AF5	I	1271	1281	Right-handed alpha
Helix 51	AF6	I	1284	1292	Right-handed alpha
Helix 52	AF7	I	1299	1310	Right-handed alpha
Helix 53	AF8	I	1320	1333	Right-handed alpha
Helix 54	AF9	J	26	33	Right-handed alpha
Helix 55	AG1	J	77	81	Right-handed 310
Helix 56	AG2	J	95	100	Right-handed 310
Helix 57	AG3	J	113	118	Right-handed alpha
Helix 58	AG4	J	122	129	Right-handed alpha
Helix 59	AG5	J	131	140	Right-handed alpha
Helix 60	AG6	J	161	172	Right-handed alpha
Helix 61	AG7	J	181	192	Right-handed alpha
Helix 62	AG8	J	193	208	Right-handed alpha
Helix 63	AG9	J	210	230	Right-handed alpha
Helix 64	AH1	J	234	236	Right-handed 310
Helix 65	AH2	J	246	250	Right-handed 310
Helix 66	AH3	J	263	286	Right-handed alpha
Helix 67	AH4	J	288	301	Right-handed alpha
Helix 68	AH5	J	304	309	Right-handed alpha
Helix 69	AH6	J	326	332	Right-handed alpha
Helix 70	AH7	J	336	341	Right-handed alpha
Helix 71	AH8	J	370	377	Right-handed alpha
Helix 72	AH9	J	377	388	Right-handed alpha
Helix 73	AI1	J	393	404	Right-handed alpha
Helix 74	AI2	J	407	416	Right-handed alpha
Helix 75	AI3	J	430	432	Right-handed 310
Helix 76	AI4	J	450	452	Right-handed 310
Helix 77	AI5	J	453	458	Right-handed alpha
Helix 78	AI6	J	473	483	Right-handed alpha
Helix 79	AI7	J	485	489	Right-handed 310
Helix 80	AI8	J	504	514	Right-handed alpha
Helix 81	AI9	J	529	539	Right-handed alpha
Helix 82	AJ1	J	574	580	Right-handed alpha
Helix 83	AJ2	J	588	593	Right-handed 310
Helix 84	AJ3	J	598	613	Right-handed alpha
Helix 85	AJ4	J	614	636	Right-handed alpha
Helix 86	AJ5	J	640	644	Right-handed 310
Helix 87	AJ6	J	649	670	Right-handed alpha
Helix 88	AJ7	J	674	702	Right-handed alpha
Helix 89	AJ8	J	720	728	Right-handed alpha
Helix 90	AJ9	J	768	804	Right-handed alpha
Helix 91	AK1	J	834	838	Right-handed 310
Helix 92	AK2	J	865	874	Right-handed alpha
Helix 93	AK3	J	884	888	Right-handed 310
Helix 94	AK4	J	914	925	Right-handed alpha
Helix 95	AK5	J	926	930	Right-handed 310
Helix 96	AK6	J	1137	1147	Right-handed alpha
Helix 97	AK7	J	1216	1225	Right-handed alpha
Helix 98	AK8	J	1225	1244	Right-handed alpha
Helix 99	AK9	J	1249	1261	Right-handed alpha
Helix 100	AL1	J	1282	1295	Right-handed alpha
Helix 101	AL2	J	1308	1313	Right-handed alpha
Helix 102	AL3	J	1319	1324	Right-handed alpha
Helix 103	AL4	J	1327	1339	Right-handed alpha
Helix 104	AL5	J	1347	1353	Right-handed alpha
Helix 105	AL6	J	1362	1373	Right-handed alpha
Helix 106	AL7	K	6	13	Right-handed alpha
Helix 107	AL8	K	17	32	Right-handed alpha
Helix 108	AL9	K	45	56	Right-handed alpha
Helix 109	AM1	K	60	78	Right-handed alpha
Helix 110	AM2	L	96	106	Right-handed alpha
Helix 111	AM3	L	112	135	Right-handed alpha
Helix 112	AM4	L	137	153	Right-handed alpha
Helix 113	AM5	L	157	162	Right-handed alpha
Helix 114	AM6	L	216	234	Right-handed alpha
Helix 115	AM7	L	245	258	Right-handed alpha
Helix 116	AM8	L	262	292	Right-handed alpha
Helix 117	AM9	L	299	307	Right-handed alpha
Helix 118	AN1	L	319	323	Right-handed 310
Helix 119	AN2	L	324	330	Right-handed alpha
Helix 120	AN3	L	333	352	Right-handed alpha
Helix 121	AN4	L	354	394	Right-handed alpha
Helix 122	AN5	L	400	418	Right-handed alpha
Helix 123	AN6	L	420	424	Right-handed 310
Helix 124	AN7	L	426	446	Right-handed alpha
Helix 125	AN8	L	453	475	Right-handed alpha
Helix 126	AN9	L	479	487	Right-handed alpha
Helix 127	AO1	L	492	501	Right-handed alpha
Helix 128	AO2	L	518	523	Right-handed alpha
Helix 129	AO3	L	530	550	Right-handed alpha
Helix 130	AO4	L	552	563	Right-handed alpha
Helix 131	AO5	L	572	581	Right-handed alpha
Helix 132	AO6	L	583	599	Right-handed alpha
Helix 133	AO7	L	603	609	Right-handed alpha

There are 51 sheets in PDB entry 7MKE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	13	17	first strand
Strand 2	G	23	31	anti-parallel
Strand 3	G	198	207	anti-parallel
Strand 4	G	180	185	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	13	17	first strand
Strand 2	G	23	31	anti-parallel
Strand 3	G	198	207	anti-parallel
Strand 4	G	188	190	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	98	105	first strand
Strand 2	G	139	146	anti-parallel
Strand 3	G	56	59	anti-parallel
Strand 4	G	171	172	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	90	92	first strand
Strand 2	G	121	123	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	108	111	first strand
Strand 2	G	129	133	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	24	31	first strand
Strand 2	H	198	207	anti-parallel
Strand 3	H	180	183	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	24	31	first strand
Strand 2	H	198	207	anti-parallel
Strand 3	H	188	190	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	97	101	first strand
Strand 2	H	142	149	anti-parallel
Strand 3	H	53	61	anti-parallel
Strand 4	H	171	172	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	90	91	first strand
Strand 2	H	122	123	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	109	111	first strand
Strand 2	H	129	132	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	152	153	first strand
Strand 2	H	175	176	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	59	60	first strand
Strand 2	I	66	75	anti-parallel
Strand 3	I	93	105	anti-parallel
Strand 4	I	114	116	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	59	60	first strand
Strand 2	I	66	75	anti-parallel
Strand 3	I	93	105	anti-parallel
Strand 4	I	119	128	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	136	137	first strand
Strand 2	I	142	145	anti-parallel
Strand 3	I	512	514	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	451	454	first strand
Strand 2	I	147	151	anti-parallel
Strand 3	I	530	531	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	154	156	first strand
Strand 2	I	175	177	anti-parallel
Strand 3	I	184	188	anti-parallel
Strand 4	I	194	197	anti-parallel
Strand 5	I	204	205	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	284	285	first strand
Strand 2	I	238	240	anti-parallel
Strand 3	I	227	231	anti-parallel
Strand 4	I	332	336	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	255	257	first strand
Strand 2	I	260	263	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	296	297	first strand
Strand 2	I	315	316	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	301	303	first strand
Strand 2	I	308	311	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	580	581	first strand
Strand 2	I	587	594	anti-parallel
Strand 3	I	599	606	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	580	581	first strand
Strand 2	I	587	594	anti-parallel
Strand 3	I	652	653	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	633	635	first strand
Strand 2	I	644	646	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	700	701	first strand
Strand 2	I	1182	1183	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	716	717	first strand
Strand 2	I	782	785	anti-parallel
Strand 3	I	768	769	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	722	727	first strand
Strand 2	I	731	736	anti-parallel
Strand 3	I	748	752	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	789	790	first strand
Strand 2	I	793	794	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1079	1080	first strand
Strand 2	I	817	819	parallel
Strand 3	I	1096	1098	anti-parallel
Strand 4	I	798	804	parallel
Strand 5	I	1225	1232	anti-parallel
Strand 6	I	1209	1210	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	830	838	first strand
Strand 2	I	1048	1058	anti-parallel
Strand 3	I	926	935	anti-parallel
Strand 4	I	876	877	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	842	843	first strand
Strand 2	I	846	847	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	882	884	first strand
Strand 2	I	918	919	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	887	889	first strand
Strand 2	I	913	915	anti-parallel

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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1244	1246	first strand
Strand 2	J	350	356	anti-parallel
Strand 3	J	465	469	anti-parallel
Strand 4	J	421	425	anti-parallel
Strand 5	J	434	442	anti-parallel
Strand 6	J	365	369	parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1244	1246	first strand
Strand 2	J	350	356	anti-parallel
Strand 3	J	447	448	parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1268	1269	first strand
Strand 2	J	346	347	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1335	1340	first strand
Strand 2	J	19	24	anti-parallel
Strand 3	J	1341	1342	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	34	37	first strand
Strand 2	J	102	112	parallel
Strand 3	J	238	244	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	252	255	first strand
Strand 2	J	259	262	anti-parallel
Strand 3	L	505	506	parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	526	527	first strand
Strand 2	J	547	550	parallel
Strand 3	J	571	573	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	552	556	first strand
Strand 2	J	564	568	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	706	707	first strand
Strand 2	J	714	715	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	820	822	first strand
Strand 2	J	880	882	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	848	849	first strand
Strand 2	J	856	858	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	949	951	first strand
Strand 2	J	1016	1019	anti-parallel
Strand 3	J	1002	1003	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	991	997	first strand
Strand 2	J	980	985	anti-parallel
Strand 3	J	957	961	anti-parallel
Strand 4	J	1009	1010	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	965	967	first strand
Strand 2	J	973	975	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1025	1028	first strand
Strand 2	J	1120	1124	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1080	1081	first strand
Strand 2	J	1033	1035	anti-parallel
Strand 3	J	1114	1115	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1049	1050	first strand
Strand 2	J	1057	1060	anti-parallel
Strand 3	J	1106	1107	anti-parallel

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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1162	1165	first strand
Strand 2	J	1172	1178	anti-parallel
Strand 3	J	1187	1191	anti-parallel

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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1279	1281	first strand
Strand 2	J	1263	1268	anti-parallel
Strand 3	J	1301	1304	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MKE

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MKE