Analysis of interatomic Contacts of Structural Units in PDB entry:
7MKF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MKF entry

There are 10 chains in PDB entry 7MKF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 306	PHE 378
B	VAL 306	PHE 378
C	VAL 306	PHE 378
D	VAL 306	PHE 378
E	VAL 306	PHE 378
F	VAL 306	PHE 378
G	VAL 306	PHE 378
H	VAL 306	PHE 378
I	VAL 306	PHE 378
J	VAL 306	PHE 378

There are no helices in PDB entry 7MKF

There are 17 sheets in PDB entry 7MKF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	307	310	first strand
Strand 2	C	307	310	parallel
Strand 3	E	307	310	parallel
Strand 4	G	307	310	parallel
Strand 5	I	307	310	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	314	first strand
Strand 2	C	313	314	parallel
Strand 3	E	313	314	parallel
Strand 4	G	313	314	parallel
Strand 5	I	313	314	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	318	326	first strand
Strand 2	C	318	326	parallel
Strand 3	E	318	326	parallel
Strand 4	G	318	326	parallel
Strand 5	I	318	326	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	329	330	first strand
Strand 2	C	329	330	parallel
Strand 3	E	329	330	parallel
Strand 4	G	329	330	parallel
Strand 5	I	329	330	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	336	340	first strand
Strand 2	C	336	340	parallel
Strand 3	E	336	340	parallel
Strand 4	G	336	340	parallel
Strand 5	I	336	340	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	343	347	first strand
Strand 2	C	343	347	parallel
Strand 3	E	343	347	parallel
Strand 4	G	343	347	parallel
Strand 5	I	343	347	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	350	356	first strand
Strand 2	C	350	356	parallel
Strand 3	E	350	356	parallel
Strand 4	G	350	356	parallel
Strand 5	I	350	356	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	360	362	first strand
Strand 2	C	360	362	parallel
Strand 3	E	360	362	parallel
Strand 4	G	360	362	parallel
Strand 5	I	360	362	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	367	377	first strand
Strand 2	C	367	377	parallel
Strand 3	E	367	377	parallel
Strand 4	G	367	377	parallel
Strand 5	I	367	377	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	307	310	first strand
Strand 2	D	307	310	parallel
Strand 3	F	307	310	parallel
Strand 4	H	307	310	parallel
Strand 5	J	307	310	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	317	324	first strand
Strand 2	D	317	324	parallel
Strand 3	F	317	324	parallel
Strand 4	H	317	324	parallel
Strand 5	J	317	324	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	328	330	first strand
Strand 2	D	328	330	parallel
Strand 3	F	328	330	parallel
Strand 4	H	328	330	parallel
Strand 5	J	328	330	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	336	340	first strand
Strand 2	D	336	340	parallel
Strand 3	F	336	340	parallel
Strand 4	H	336	340	parallel
Strand 5	J	336	340	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	346	347	first strand
Strand 2	D	346	347	parallel
Strand 3	F	346	347	parallel
Strand 4	H	346	347	parallel
Strand 5	J	346	347	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	350	356	first strand
Strand 2	D	350	356	parallel
Strand 3	F	350	356	parallel
Strand 4	H	350	356	parallel
Strand 5	J	350	356	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	360	362	first strand
Strand 2	D	360	362	parallel
Strand 3	F	360	362	parallel
Strand 4	H	360	362	parallel
Strand 5	J	360	362	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	367	377	first strand
Strand 2	D	367	377	parallel
Strand 3	F	367	377	parallel
Strand 4	H	367	377	parallel
Strand 5	J	367	377	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MKF

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MKF