Analysis of interatomic Contacts of Structural Units in PDB entry:
7MKH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MKH entry

There are 10 chains in PDB entry 7MKH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 305ARG 379
B
 SER 305ARG 379
C
 SER 305ARG 379
D
 SER 305ARG 379
E
 SER 305ARG 379
F
 SER 305ARG 379
G
 SER 305ARG 379
H
 SER 305ARG 379
I
 SER 305ARG 379
J
 SER 305ARG 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 7MKH

There are 16 sheets in PDB entry 7MKH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 310first strand
Strand 2
C
306 310parallel
Strand 3
E
306 310parallel
Strand 4
G
306 310parallel
Strand 5
I
306 310parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 320first strand
Strand 2
C
316 320parallel
Strand 3
E
316 320parallel
Strand 4
G
316 320parallel
Strand 5
I
316 320parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 330first strand
Strand 2
C
329 330parallel
Strand 3
E
329 330parallel
Strand 4
G
329 330parallel
Strand 5
I
329 330parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 340first strand
Strand 2
C
336 340parallel
Strand 3
E
336 340parallel
Strand 4
G
336 340parallel
Strand 5
I
336 340parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
343 347first strand
Strand 2
C
343 347parallel
Strand 3
E
343 347parallel
Strand 4
G
343 347parallel
Strand 5
I
343 347parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
350 356first strand
Strand 2
C
350 356parallel
Strand 3
E
350 356parallel
Strand 4
G
350 356parallel
Strand 5
I
350 356parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 362first strand
Strand 2
C
360 362parallel
Strand 3
E
360 362parallel
Strand 4
G
360 362parallel
Strand 5
I
360 362parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 376first strand
Strand 2
C
367 376parallel
Strand 3
E
367 376parallel
Strand 4
G
367 376parallel
Strand 5
I
367 376parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
306 310first strand
Strand 2
D
306 310parallel
Strand 3
F
306 310parallel
Strand 4
H
306 310parallel
Strand 5
J
306 310parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
316 324first strand
Strand 2
D
316 324parallel
Strand 3
F
316 324parallel
Strand 4
H
316 324parallel
Strand 5
J
316 324parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
329 330first strand
Strand 2
D
329 330parallel
Strand 3
F
329 330parallel
Strand 4
H
329 330parallel
Strand 5
J
329 330parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
336 340first strand
Strand 2
D
336 340parallel
Strand 3
F
336 340parallel
Strand 4
H
336 340parallel
Strand 5
J
336 340parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
343 347first strand
Strand 2
D
343 347parallel
Strand 3
F
343 347parallel
Strand 4
H
343 347parallel
Strand 5
J
343 347parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
350 356first strand
Strand 2
D
350 356parallel
Strand 3
F
350 356parallel
Strand 4
H
350 356parallel
Strand 5
J
350 356parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
360 362first strand
Strand 2
D
360 362parallel
Strand 3
F
360 362parallel
Strand 4
H
360 362parallel
Strand 5
J
360 362parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
367 378first strand
Strand 2
D
367 378parallel
Strand 3
F
367 378parallel
Strand 4
H
367 378parallel
Strand 5
J
367 378parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il