Analysis of interatomic Contacts of Structural Units in PDB entry:
7MLU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MLU entry

There are 15 chains in PDB entry 7MLU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
K	ILE 2	LYS 103
F	VAL 2	VAL 116
J	ILE 2	THR 102
G	VAL 2	VAL 116
O	ILE 2	LYS 103
N	VAL 2	VAL 116
M	ILE 2	LEU 104
L	VAL 2	VAL 116
I	ILE 2	LEU 104
H	VAL 2	VAL 116
A	SER 9	ILE 419
E	SER 9	ILE 419
D	SER 9	ILE 419
B	SER 9	ILE 419
C	SER 9	ILE 419

There are 64 helices in PDB entry 7MLU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	K	79	83	Right-handed 310
Helix 2	AA2	F	87	91	Right-handed 310
Helix 3	AA3	G	87	91	Right-handed 310
Helix 4	AA4	O	79	83	Right-handed 310
Helix 5	AA5	N	87	91	Right-handed 310
Helix 6	AA6	M	79	83	Right-handed 310
Helix 7	AA7	L	87	91	Right-handed 310
Helix 8	AA8	I	50	52	Right-handed 310
Helix 9	AA9	I	79	83	Right-handed 310
Helix 10	AB1	A	10	18	Right-handed alpha
Helix 11	AB2	A	88	93	Right-handed 310
Helix 12	AB3	A	144	147	Right-handed 310
Helix 13	AB4	A	220	226	Right-handed alpha
Helix 14	AB5	A	227	238	Right-handed alpha
Helix 15	AB6	A	239	243	Right-handed 310
Helix 16	AB7	A	248	269	Right-handed alpha
Helix 17	AB8	A	282	296	Right-handed alpha
Helix 18	AB9	A	297	308	Right-handed alpha
Helix 19	AC1	A	389	400	Right-handed alpha
Helix 20	AC2	A	406	417	Right-handed alpha
Helix 21	AC3	E	10	18	Right-handed alpha
Helix 22	AC4	E	88	93	Right-handed 310
Helix 23	AC5	E	144	147	Right-handed 310
Helix 24	AC6	E	220	226	Right-handed alpha
Helix 25	AC7	E	227	238	Right-handed alpha
Helix 26	AC8	E	239	243	Right-handed 310
Helix 27	AC9	E	248	269	Right-handed alpha
Helix 28	AD1	E	282	296	Right-handed alpha
Helix 29	AD2	E	297	308	Right-handed alpha
Helix 30	AD3	E	389	400	Right-handed alpha
Helix 31	AD4	E	406	417	Right-handed alpha
Helix 32	AD5	D	10	18	Right-handed alpha
Helix 33	AD6	D	88	93	Right-handed 310
Helix 34	AD7	D	144	147	Right-handed 310
Helix 35	AD8	D	220	226	Right-handed alpha
Helix 36	AD9	D	227	238	Right-handed alpha
Helix 37	AE1	D	239	243	Right-handed 310
Helix 38	AE2	D	248	269	Right-handed alpha
Helix 39	AE3	D	282	296	Right-handed alpha
Helix 40	AE4	D	297	308	Right-handed alpha
Helix 41	AE5	D	389	400	Right-handed alpha
Helix 42	AE6	D	406	417	Right-handed alpha
Helix 43	AE7	B	10	18	Right-handed alpha
Helix 44	AE8	B	88	93	Right-handed 310
Helix 45	AE9	B	144	147	Right-handed 310
Helix 46	AF1	B	220	226	Right-handed alpha
Helix 47	AF2	B	227	238	Right-handed alpha
Helix 48	AF3	B	239	243	Right-handed 310
Helix 49	AF4	B	248	269	Right-handed alpha
Helix 50	AF5	B	282	296	Right-handed alpha
Helix 51	AF6	B	297	308	Right-handed alpha
Helix 52	AF7	B	389	400	Right-handed alpha
Helix 53	AF8	B	406	417	Right-handed alpha
Helix 54	AF9	C	10	18	Right-handed alpha
Helix 55	AG1	C	88	93	Right-handed 310
Helix 56	AG2	C	144	147	Right-handed 310
Helix 57	AG3	C	220	226	Right-handed alpha
Helix 58	AG4	C	227	238	Right-handed alpha
Helix 59	AG5	C	239	243	Right-handed 310
Helix 60	AG6	C	248	269	Right-handed alpha
Helix 61	AG7	C	282	296	Right-handed alpha
Helix 62	AG8	C	297	308	Right-handed alpha
Helix 63	AG9	C	389	400	Right-handed alpha
Helix 64	AH1	C	406	417	Right-handed alpha

There are 41 sheets in PDB entry 7MLU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	19	21	first strand
Strand 2	K	72	75	anti-parallel
Strand 3	K	62	65	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	44	48	first strand
Strand 2	K	34	38	anti-parallel
Strand 3	K	85	89	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	6	first strand
Strand 2	F	19	24	anti-parallel
Strand 3	F	78	82	anti-parallel
Strand 4	F	69	73	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	47	51	first strand
Strand 2	F	34	39	anti-parallel
Strand 3	F	92	97	anti-parallel
Strand 4	F	112	114	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	19	22	first strand
Strand 2	J	72	75	anti-parallel
Strand 3	J	63	65	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	44	48	first strand
Strand 2	J	33	38	anti-parallel
Strand 3	J	85	90	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	4	6	first strand
Strand 2	G	19	24	anti-parallel
Strand 3	G	78	82	anti-parallel
Strand 4	G	69	73	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	47	51	first strand
Strand 2	G	34	39	anti-parallel
Strand 3	G	92	97	anti-parallel
Strand 4	G	112	114	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	19	21	first strand
Strand 2	O	72	75	anti-parallel
Strand 3	O	62	65	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	44	48	first strand
Strand 2	O	34	38	anti-parallel
Strand 3	O	85	89	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	4	6	first strand
Strand 2	N	19	24	anti-parallel
Strand 3	N	78	82	anti-parallel
Strand 4	N	69	73	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	47	51	first strand
Strand 2	N	34	39	anti-parallel
Strand 3	N	92	97	anti-parallel
Strand 4	N	112	114	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	19	23	first strand
Strand 2	M	70	75	anti-parallel
Strand 3	M	62	67	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	53	54	first strand
Strand 2	M	44	49	anti-parallel
Strand 3	M	33	38	anti-parallel
Strand 4	M	85	90	anti-parallel
Strand 5	M	102	103	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	6	first strand
Strand 2	L	19	24	anti-parallel
Strand 3	L	78	82	anti-parallel
Strand 4	L	69	73	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	47	51	first strand
Strand 2	L	34	39	anti-parallel
Strand 3	L	92	97	anti-parallel
Strand 4	L	112	114	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	20	22	first strand
Strand 2	I	72	74	anti-parallel
Strand 3	I	63	65	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	44	46	first strand
Strand 2	I	35	38	anti-parallel
Strand 3	I	85	88	anti-parallel
Strand 4	I	102	103	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	48	49	first strand
Strand 2	I	53	54	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	6	first strand
Strand 2	H	19	24	anti-parallel
Strand 3	H	78	82	anti-parallel
Strand 4	H	69	73	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	47	51	first strand
Strand 2	H	34	39	anti-parallel
Strand 3	H	92	97	anti-parallel
Strand 4	H	112	114	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	84	first strand
Strand 2	A	116	120	anti-parallel
Strand 3	A	125	134	anti-parallel
Strand 4	A	60	69	anti-parallel
Strand 5	A	37	45	anti-parallel
Strand 6	A	166	169	parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	84	first strand
Strand 2	A	116	120	anti-parallel
Strand 3	A	125	134	anti-parallel
Strand 4	A	60	69	anti-parallel
Strand 5	A	37	45	anti-parallel
Strand 6	A	177	178	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	100	first strand
Strand 2	A	149	158	anti-parallel
Strand 3	A	206	218	anti-parallel
Strand 4	A	187	189	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	100	first strand
Strand 2	A	149	158	anti-parallel
Strand 3	A	206	218	anti-parallel
Strand 4	A	199	201	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	83	84	first strand
Strand 2	E	116	120	anti-parallel
Strand 3	E	125	134	anti-parallel
Strand 4	E	60	69	anti-parallel
Strand 5	E	37	45	anti-parallel
Strand 6	E	166	169	parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	83	84	first strand
Strand 2	E	116	120	anti-parallel
Strand 3	E	125	134	anti-parallel
Strand 4	E	60	69	anti-parallel
Strand 5	E	37	45	anti-parallel
Strand 6	E	177	178	parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	98	100	first strand
Strand 2	E	149	158	anti-parallel
Strand 3	E	206	218	anti-parallel
Strand 4	E	187	189	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	98	100	first strand
Strand 2	E	149	158	anti-parallel
Strand 3	E	206	218	anti-parallel
Strand 4	E	199	201	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	83	84	first strand
Strand 2	D	116	120	anti-parallel
Strand 3	D	125	134	anti-parallel
Strand 4	D	60	69	anti-parallel
Strand 5	D	37	45	anti-parallel
Strand 6	D	166	169	parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	83	84	first strand
Strand 2	D	116	120	anti-parallel
Strand 3	D	125	134	anti-parallel
Strand 4	D	60	69	anti-parallel
Strand 5	D	37	45	anti-parallel
Strand 6	D	177	178	parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	98	100	first strand
Strand 2	D	149	158	anti-parallel
Strand 3	D	206	218	anti-parallel
Strand 4	D	187	189	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	98	100	first strand
Strand 2	D	149	158	anti-parallel
Strand 3	D	206	218	anti-parallel
Strand 4	D	199	201	anti-parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	84	first strand
Strand 2	B	116	120	anti-parallel
Strand 3	B	125	134	anti-parallel
Strand 4	B	60	69	anti-parallel
Strand 5	B	37	45	anti-parallel
Strand 6	B	166	169	parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	84	first strand
Strand 2	B	116	120	anti-parallel
Strand 3	B	125	134	anti-parallel
Strand 4	B	60	69	anti-parallel
Strand 5	B	37	45	anti-parallel
Strand 6	B	177	178	parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	100	first strand
Strand 2	B	149	158	anti-parallel
Strand 3	B	206	218	anti-parallel
Strand 4	B	187	189	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	100	first strand
Strand 2	B	149	158	anti-parallel
Strand 3	B	206	218	anti-parallel
Strand 4	B	199	201	anti-parallel

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There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	84	first strand
Strand 2	C	116	120	anti-parallel
Strand 3	C	125	134	anti-parallel
Strand 4	C	60	69	anti-parallel
Strand 5	C	37	45	anti-parallel
Strand 6	C	166	169	parallel

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There are 6 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	84	first strand
Strand 2	C	116	120	anti-parallel
Strand 3	C	125	134	anti-parallel
Strand 4	C	60	69	anti-parallel
Strand 5	C	37	45	anti-parallel
Strand 6	C	177	178	parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	100	first strand
Strand 2	C	149	158	anti-parallel
Strand 3	C	206	218	anti-parallel
Strand 4	C	187	189	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	100	first strand
Strand 2	C	149	158	anti-parallel
Strand 3	C	206	218	anti-parallel
Strand 4	C	199	201	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MLU

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MLU