Analysis of interatomic Contacts of Structural Units in PDB entry:
7MMN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MMN entry

There are 7 chains in PDB entry 7MMN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
L	ASP 2	GLY 217
E	ASP 2	GLY 217
G	ASP 2	GLY 217
A	GLN 26	MET 97
B	PHE 137	SER 509
C	GLN 26	MET 97
I	PHE 137	MET 264

There are 76 helices in PDB entry 7MMN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	L	80	84	Right-handed 310
Helix 2	AA2	L	126	132	Right-handed alpha
Helix 3	AA3	L	188	193	Right-handed alpha
Helix 4	AA4	E	80	84	Right-handed 310
Helix 5	AA5	E	126	132	Right-handed alpha
Helix 6	AA6	E	188	193	Right-handed alpha
Helix 7	AA7	G	80	84	Right-handed 310
Helix 8	AA8	G	126	132	Right-handed alpha
Helix 9	AA9	G	188	193	Right-handed alpha
Helix 10	AB1	A	73	96	Right-handed alpha
Helix 11	AB2	B	138	142	Right-handed 310
Helix 12	AB3	B	148	159	Right-handed alpha
Helix 13	AB4	B	162	171	Right-handed alpha
Helix 14	AB5	B	195	203	Right-handed alpha
Helix 15	AB6	B	203	208	Right-handed alpha
Helix 16	AB7	B	217	225	Right-handed alpha
Helix 17	AB8	B	227	240	Right-handed alpha
Helix 18	AB9	B	253	263	Right-handed alpha
Helix 19	AC1	B	267	277	Right-handed alpha
Helix 20	AC2	B	277	284	Right-handed alpha
Helix 21	AC3	B	354	356	Right-handed 310
Helix 22	AC4	B	369	372	Right-handed 310
Helix 23	AC5	B	376	379	Right-handed 310
Helix 24	AC6	B	380	385	Right-handed alpha
Helix 25	AC7	B	473	478	Right-handed 310
Helix 26	AC8	B	492	508	Right-handed alpha
Helix 27	AC9	C	73	95	Right-handed alpha
Helix 28	AD1	I	138	142	Right-handed 310
Helix 29	AD2	I	148	159	Right-handed alpha
Helix 30	AD3	I	162	171	Right-handed alpha
Helix 31	AD4	I	195	203	Right-handed alpha
Helix 32	AD5	I	203	208	Right-handed alpha
Helix 33	AD6	I	217	225	Right-handed alpha
Helix 34	AD7	I	227	240	Right-handed alpha
Helix 35	AD8	I	253	263	Right-handed alpha
Helix 36	AD9	I	267	277	Right-handed alpha
Helix 37	AE1	I	277	284	Right-handed alpha
Helix 38	AE2	I	354	356	Right-handed 310
Helix 39	AE3	I	370	372	Right-handed 310
Helix 40	AE4	I	380	385	Right-handed alpha
Helix 41	AE5	I	473	478	Right-handed 310
Helix 42	AE6	I	492	508	Right-handed alpha
Helix 43	AE7	J	73	96	Right-handed alpha
Helix 44	AE8	K	148	159	Right-handed alpha
Helix 45	AE9	K	163	171	Right-handed alpha
Helix 46	AF1	K	195	203	Right-handed alpha
Helix 47	AF2	K	203	208	Right-handed alpha
Helix 48	AF3	K	217	225	Right-handed alpha
Helix 49	AF4	K	227	240	Right-handed alpha
Helix 50	AF5	K	253	263	Right-handed alpha
Helix 51	AF6	K	267	277	Right-handed alpha
Helix 52	AF7	K	277	284	Right-handed alpha
Helix 53	AF8	K	354	358	Right-handed 310
Helix 54	AF9	K	370	372	Right-handed 310
Helix 55	AG1	K	376	379	Right-handed 310
Helix 56	AG2	K	380	385	Right-handed alpha
Helix 57	AG3	K	473	478	Right-handed 310
Helix 58	AG4	K	492	508	Right-handed alpha
Helix 59	AG5	M	28	30	Right-handed 310
Helix 60	AG6	M	62	65	Right-handed 310
Helix 61	AG7	M	87	91	Right-handed 310
Helix 62	AG8	M	166	168	Right-handed 310
Helix 63	AG9	M	195	199	Right-handed 310
Helix 64	AH1	M	211	214	Right-handed 310
Helix 65	AH2	H	28	32	Right-handed 310
Helix 66	AH3	H	62	65	Right-handed 310
Helix 67	AH4	H	87	91	Right-handed 310
Helix 68	AH5	H	166	168	Right-handed 310
Helix 69	AH6	H	195	199	Right-handed 310
Helix 70	AH7	H	212	214	Right-handed 310
Helix 71	AH8	D	28	32	Right-handed 310
Helix 72	AH9	D	62	65	Right-handed 310
Helix 73	AI1	D	87	91	Right-handed 310
Helix 74	AI2	D	166	168	Right-handed 310
Helix 75	AI3	D	195	199	Right-handed 310
Helix 76	AI4	D	211	214	Right-handed 310

There are 48 sheets in PDB entry 7MMN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	5	8	first strand
Strand 2	L	20	26	anti-parallel
Strand 3	L	71	76	anti-parallel
Strand 4	L	63	68	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	11	14	first strand
Strand 2	L	104	108	parallel
Strand 3	L	85	91	anti-parallel
Strand 4	L	34	39	anti-parallel
Strand 5	L	45	50	anti-parallel
Strand 6	L	54	55	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	119	123	first strand
Strand 2	L	134	144	anti-parallel
Strand 3	L	178	187	anti-parallel
Strand 4	L	164	168	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	158	159	first strand
Strand 2	L	150	155	anti-parallel
Strand 3	L	196	202	anti-parallel
Strand 4	L	210	215	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	8	first strand
Strand 2	E	20	26	anti-parallel
Strand 3	E	71	76	anti-parallel
Strand 4	E	63	68	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	14	first strand
Strand 2	E	104	108	parallel
Strand 3	E	85	91	anti-parallel
Strand 4	E	34	39	anti-parallel
Strand 5	E	45	50	anti-parallel
Strand 6	E	54	55	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	119	123	first strand
Strand 2	E	134	144	anti-parallel
Strand 3	E	178	187	anti-parallel
Strand 4	E	164	168	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	159	first strand
Strand 2	E	150	155	anti-parallel
Strand 3	E	196	202	anti-parallel
Strand 4	E	210	215	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	5	7	first strand
Strand 2	G	20	26	anti-parallel
Strand 3	G	71	76	anti-parallel
Strand 4	G	63	68	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	14	first strand
Strand 2	G	104	108	parallel
Strand 3	G	85	91	anti-parallel
Strand 4	G	34	39	anti-parallel
Strand 5	G	45	50	anti-parallel
Strand 6	G	54	55	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	119	123	first strand
Strand 2	G	134	144	anti-parallel
Strand 3	G	178	187	anti-parallel
Strand 4	G	164	168	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	158	159	first strand
Strand 2	G	150	155	anti-parallel
Strand 3	G	196	202	anti-parallel
Strand 4	G	210	215	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	358	360	first strand
Strand 2	B	364	367	anti-parallel
Strand 3	A	38	48	parallel
Strand 4	B	308	318	anti-parallel
Strand 5	B	340	345	anti-parallel
Strand 6	B	348	352	anti-parallel
Strand 7	B	373	375	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	358	360	first strand
Strand 2	B	364	367	anti-parallel
Strand 3	A	38	48	parallel
Strand 4	A	29	33	anti-parallel
Strand 5	B	465	469	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	176	180	first strand
Strand 2	B	186	194	anti-parallel
Strand 3	A	52	60	parallel
Strand 4	B	296	304	anti-parallel
Strand 5	B	286	293	anti-parallel
Strand 6	B	243	244	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	321	322	first strand
Strand 2	B	333	336	anti-parallel
Strand 3	B	394	398	anti-parallel
Strand 4	B	487	491	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	404	408	first strand
Strand 2	B	411	416	anti-parallel
Strand 3	B	438	443	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	430	434	first strand
Strand 2	B	422	426	anti-parallel
Strand 3	B	449	452	anti-parallel
Strand 4	B	455	458	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	358	360	first strand
Strand 2	I	364	368	anti-parallel
Strand 3	C	38	49	parallel
Strand 4	I	308	318	anti-parallel
Strand 5	I	340	345	anti-parallel
Strand 6	I	348	352	anti-parallel
Strand 7	I	373	376	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	358	360	first strand
Strand 2	I	364	368	anti-parallel
Strand 3	C	38	49	parallel
Strand 4	C	29	33	anti-parallel
Strand 5	I	465	469	parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	176	180	first strand
Strand 2	I	186	194	anti-parallel
Strand 3	C	55	60	parallel
Strand 4	I	296	302	anti-parallel
Strand 5	I	286	293	anti-parallel
Strand 6	I	243	244	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	321	322	first strand
Strand 2	I	333	336	anti-parallel
Strand 3	I	394	398	anti-parallel
Strand 4	I	487	491	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	404	408	first strand
Strand 2	I	411	416	anti-parallel
Strand 3	I	438	442	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	430	434	first strand
Strand 2	I	422	426	anti-parallel
Strand 3	I	449	452	anti-parallel
Strand 4	I	455	458	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	359	360	first strand
Strand 2	K	364	368	anti-parallel
Strand 3	J	38	49	parallel
Strand 4	K	308	318	anti-parallel
Strand 5	K	340	345	anti-parallel
Strand 6	K	348	352	anti-parallel
Strand 7	K	373	375	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	359	360	first strand
Strand 2	K	364	368	anti-parallel
Strand 3	J	38	49	parallel
Strand 4	J	29	33	anti-parallel
Strand 5	K	465	469	parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	176	180	first strand
Strand 2	K	186	194	anti-parallel
Strand 3	J	53	60	parallel
Strand 4	K	296	303	anti-parallel
Strand 5	K	286	293	anti-parallel
Strand 6	K	243	244	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	321	322	first strand
Strand 2	K	333	336	anti-parallel
Strand 3	K	394	398	anti-parallel
Strand 4	K	487	491	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	404	408	first strand
Strand 2	K	411	416	anti-parallel
Strand 3	K	438	442	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	430	434	first strand
Strand 2	K	422	426	anti-parallel
Strand 3	K	449	452	anti-parallel
Strand 4	K	455	458	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	3	7	first strand
Strand 2	M	18	25	anti-parallel
Strand 3	M	78	83	anti-parallel
Strand 4	M	68	73	anti-parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	10	11	first strand
Strand 2	M	117	120	parallel
Strand 3	M	92	102	anti-parallel
Strand 4	M	32	39	anti-parallel
Strand 5	M	45	51	anti-parallel
Strand 6	M	58	60	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	10	11	first strand
Strand 2	M	117	120	parallel
Strand 3	M	92	102	anti-parallel
Strand 4	M	110	113	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	130	134	first strand
Strand 2	M	146	155	anti-parallel
Strand 3	M	186	194	anti-parallel
Strand 4	M	173	175	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	130	134	first strand
Strand 2	M	146	155	anti-parallel
Strand 3	M	186	194	anti-parallel
Strand 4	M	179	180	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	161	164	first strand
Strand 2	M	204	210	anti-parallel
Strand 3	M	215	221	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	68	73	anti-parallel

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There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	11	first strand
Strand 2	H	117	120	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	45	51	anti-parallel
Strand 6	H	58	60	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	11	first strand
Strand 2	H	117	120	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	110	113	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	130	134	first strand
Strand 2	H	146	155	anti-parallel
Strand 3	H	186	194	anti-parallel
Strand 4	H	173	175	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	130	134	first strand
Strand 2	H	146	155	anti-parallel
Strand 3	H	186	194	anti-parallel
Strand 4	H	179	180	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	160	164	first strand
Strand 2	H	204	210	anti-parallel
Strand 3	H	215	221	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	7	first strand
Strand 2	D	18	25	anti-parallel
Strand 3	D	78	83	anti-parallel
Strand 4	D	68	73	anti-parallel

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There are 6 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	11	first strand
Strand 2	D	117	120	parallel
Strand 3	D	92	99	anti-parallel
Strand 4	D	34	39	anti-parallel
Strand 5	D	45	51	anti-parallel
Strand 6	D	58	60	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	11	first strand
Strand 2	D	117	120	parallel
Strand 3	D	92	99	anti-parallel
Strand 4	D	110	113	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	130	134	first strand
Strand 2	D	146	155	anti-parallel
Strand 3	D	186	194	anti-parallel
Strand 4	D	173	175	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	130	134	first strand
Strand 2	D	146	155	anti-parallel
Strand 3	D	186	194	anti-parallel
Strand 4	D	179	180	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	161	164	first strand
Strand 2	D	204	210	anti-parallel
Strand 3	D	215	221	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MMN

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MMN