Analysis of interatomic Contacts of Structural Units in PDB entry:
7MMZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MMZ entry

There is 1 chain in PDB entry 7MMZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 12ALA 575
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7MMZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 30Right-handed alpha
Helix 2
AA2
A
58 64Right-handed alpha
Helix 3
AA3
A
65 68Right-handed 310
Helix 4
AA4
A
92 109Right-handed alpha
Helix 5
AA5
A
124 138Right-handed alpha
Helix 6
AA6
A
149 161Right-handed alpha
Helix 7
AA7
A
179 189Right-handed alpha
Helix 8
AA8
A
215 219Right-handed alpha
Helix 9
AA9
A
220 222Right-handed 310
Helix 10
AB1
A
256 272Right-handed alpha
Helix 11
AB2
A
287 294Right-handed alpha
Helix 12
AB3
A
295 301Right-handed alpha
Helix 13
AB4
A
318 328Right-handed alpha
Helix 14
AB5
A
335 346Right-handed alpha
Helix 15
AB6
A
347 351Right-handed 310
Helix 16
AB7
A
369 379Right-handed alpha
Helix 17
AB8
A
393 397Right-handed 310
Helix 18
AB9
A
458 466Right-handed alpha
Helix 19
AC1
A
504 514Right-handed alpha
Helix 20
AC2
A
548 563Right-handed alpha
Helix 21
AC3
A
564 568Right-handed 310
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There are 10 sheets in PDB entry 7MMZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 41first strand
Strand 2
A
50 53anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 57first strand
Strand 2
A
231 232anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 91first strand
Strand 2
A
75 80anti-parallel
Strand 3
A
304 308parallel
Strand 4
A
278 281parallel
Strand 5
A
331 334parallel
Strand 6
A
360 363parallel
Strand 7
A
387 389parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 143first strand
Strand 2
A
116 120parallel
Strand 3
A
164 168parallel
Strand 4
A
194 198parallel
Strand 5
A
212 214parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 173first strand
Strand 2
A
176 178anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 242first strand
Strand 2
A
250 255anti-parallel
Strand 3
A
454 455anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 427first strand
Strand 2
A
438 444anti-parallel
Strand 3
A
471 480anti-parallel
Strand 4
A
467 468anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 427first strand
Strand 2
A
438 444anti-parallel
Strand 3
A
471 480anti-parallel
Strand 4
A
486 491anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
496 498first strand
Strand 2
A
501 503anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
520 528first strand
Strand 2
A
532 540anti-parallel
Strand 3
A
571 574parallel
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