Analysis of interatomic Contacts of Structural Units in PDB entry:
7MN8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MN8 entry

There are 5 chains in PDB entry 7MN8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 28	LEU 630
H	SER 177	ALA 227
B	GLN 24	ASN 629
C	ASP 1	CYS 214
D	GLU 1	PRO 220

There are 40 helices in PDB entry 7MN8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	41	54	Right-handed alpha
Helix 2	AA2	A	74	80	Right-handed 310
Helix 3	AA3	A	110	113	Right-handed 310
Helix 4	AA4	A	162	166	Right-handed 310
Helix 5	AA5	A	187	191	Right-handed 310
Helix 6	AA6	A	198	202	Right-handed 310
Helix 7	AA7	A	222	226	Right-handed 310
Helix 8	AA8	A	347	352	Right-handed 310
Helix 9	AA9	A	365	370	Right-handed alpha
Helix 10	AB1	A	371	375	Right-handed 310
Helix 11	AB2	A	380	390	Right-handed 310
Helix 12	AB3	A	409	413	Right-handed 310
Helix 13	AB4	A	423	426	Right-handed 310
Helix 14	AB5	A	469	473	Right-handed 310
Helix 15	AB6	A	489	496	Right-handed alpha
Helix 16	AB7	A	513	517	Right-handed 310
Helix 17	AB8	A	625	629	Right-handed 310
Helix 18	AB9	H	185	190	Right-handed 310
Helix 19	AC1	B	38	51	Right-handed alpha
Helix 20	AC2	B	71	77	Right-handed 310
Helix 21	AC3	B	168	173	Right-handed alpha
Helix 22	AC4	B	208	212	Right-handed 310
Helix 23	AC5	B	231	235	Right-handed 310
Helix 24	AC6	B	347	351	Right-handed 310
Helix 25	AC7	B	360	365	Right-handed 310
Helix 26	AC8	B	377	382	Right-handed alpha
Helix 27	AC9	B	396	403	Right-handed 310
Helix 28	AD1	B	422	426	Right-handed 310
Helix 29	AD2	B	436	439	Right-handed 310
Helix 30	AD3	B	481	485	Right-handed 310
Helix 31	AD4	B	500	507	Right-handed alpha
Helix 32	AD5	B	515	519	Right-handed 310
Helix 33	AD6	C	79	83	Right-handed 310
Helix 34	AD7	C	121	126	Right-handed alpha
Helix 35	AD8	C	183	188	Right-handed alpha
Helix 36	AD9	D	28	32	Right-handed 310
Helix 37	AE1	D	87	91	Right-handed 310
Helix 38	AE2	D	163	165	Right-handed 310
Helix 39	AE3	D	194	196	Right-handed 310
Helix 40	AE4	D	208	211	Right-handed 310

There are 37 sheets in PDB entry 7MN8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	30	first strand
Strand 2	A	58	60	parallel
Strand 3	A	82	83	parallel
Strand 4	A	104	105	parallel
Strand 5	A	141	142	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	39	first strand
Strand 2	H	208	212	parallel
Strand 3	H	195	199	anti-parallel
Strand 4	H	179	181	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	66	first strand
Strand 2	A	87	90	parallel
Strand 3	A	115	120	parallel
Strand 4	A	146	150	parallel
Strand 5	A	174	176	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	231	235	first strand
Strand 2	A	243	246	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	249	251	first strand
Strand 2	A	254	256	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	263	266	first strand
Strand 2	A	271	274	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	280	282	first strand
Strand 2	A	285	287	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	300	302	first strand
Strand 2	A	295	297	anti-parallel
Strand 3	A	318	321	parallel
Strand 4	A	310	313	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	357	first strand
Strand 2	A	392	393	parallel
Strand 3	A	417	418	parallel
Strand 4	A	448	449	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	363	first strand
Strand 2	A	397	399	parallel
Strand 3	A	428	433	parallel
Strand 4	A	453	457	parallel
Strand 5	A	482	483	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	523	525	first strand
Strand 2	A	528	530	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	542	545	first strand
Strand 2	A	548	551	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	579	581	first strand
Strand 2	A	584	586	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	591	595	first strand
Strand 2	A	598	604	anti-parallel
Strand 3	A	610	612	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	216	217	first strand
Strand 2	H	223	224	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	27	first strand
Strand 2	B	55	57	parallel
Strand 3	B	79	80	parallel
Strand 4	B	101	102	parallel
Strand 5	B	147	148	parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	63	first strand
Strand 2	B	84	87	parallel
Strand 3	B	112	117	parallel
Strand 4	B	152	156	parallel
Strand 5	B	182	184	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	260	first strand
Strand 2	B	263	264	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	272	275	first strand
Strand 2	B	280	283	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	289	291	first strand
Strand 2	B	294	296	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	319	322	first strand
Strand 2	B	330	333	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	342	343	first strand
Strand 2	B	369	371	parallel
Strand 3	B	405	406	parallel
Strand 4	B	430	431	parallel
Strand 5	B	460	461	parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	374	376	first strand
Strand 2	B	410	412	parallel
Strand 3	B	441	446	parallel
Strand 4	B	465	469	parallel
Strand 5	B	493	496	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	553	556	first strand
Strand 2	B	559	562	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	590	592	first strand
Strand 2	B	595	597	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	615	617	first strand
Strand 2	B	623	625	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	7	first strand
Strand 2	C	19	25	anti-parallel
Strand 3	C	70	75	anti-parallel
Strand 4	C	62	67	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	13	first strand
Strand 2	C	102	106	parallel
Strand 3	C	85	90	anti-parallel
Strand 4	C	33	38	anti-parallel
Strand 5	C	44	49	anti-parallel
Strand 6	C	53	54	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	13	first strand
Strand 2	C	102	106	parallel
Strand 3	C	85	90	anti-parallel
Strand 4	C	97	98	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	114	118	first strand
Strand 2	C	129	139	anti-parallel
Strand 3	C	173	182	anti-parallel
Strand 4	C	159	163	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	153	154	first strand
Strand 2	C	145	150	anti-parallel
Strand 3	C	191	197	anti-parallel
Strand 4	C	205	210	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	7	first strand
Strand 2	D	18	25	anti-parallel
Strand 3	D	78	83	anti-parallel
Strand 4	D	68	73	anti-parallel

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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	12	first strand
Strand 2	D	114	118	parallel
Strand 3	D	92	99	anti-parallel
Strand 4	D	33	39	anti-parallel
Strand 5	D	46	51	anti-parallel
Strand 6	D	58	60	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	12	first strand
Strand 2	D	114	118	parallel
Strand 3	D	92	99	anti-parallel
Strand 4	D	109	110	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	131	first strand
Strand 2	D	142	152	anti-parallel
Strand 3	D	138	139	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	131	first strand
Strand 2	D	142	152	anti-parallel
Strand 3	D	183	192	anti-parallel
Strand 4	D	170	177	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	161	first strand
Strand 2	D	202	207	anti-parallel
Strand 3	D	212	217	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MN8

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MN8