Analysis of interatomic Contacts of Structural Units in PDB entry:
7MNL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MNL entry

There is 1 chain in PDB entry 7MNL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 3	ILE 626

There are 86 helices in PDB entry 7MNL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	17	Right-handed alpha
Helix 2	AA2	A	21	28	Right-handed alpha
Helix 3	AA3	A	28	37	Right-handed alpha
Helix 4	AA4	A	41	56	Right-handed alpha
Helix 5	AA5	A	59	73	Right-handed alpha
Helix 6	AA6	A	75	90	Right-handed alpha
Helix 7	AA7	A	93	108	Right-handed alpha
Helix 8	AA8	A	111	125	Right-handed alpha
Helix 9	AA9	A	128	141	Right-handed alpha
Helix 10	AB1	A	143	161	Right-handed alpha
Helix 11	AB2	A	164	178	Right-handed alpha
Helix 12	AB3	A	180	192	Right-handed alpha
Helix 13	AB4	A	194	199	Right-handed alpha
Helix 14	AB5	A	200	217	Right-handed alpha
Helix 15	AB6	A	217	224	Right-handed alpha
Helix 16	AB7	A	227	250	Right-handed alpha
Helix 17	AB8	A	251	271	Right-handed alpha
Helix 18	AB9	A	276	304	Right-handed alpha
Helix 19	AC1	A	305	326	Right-handed alpha
Helix 20	AC2	A	336	363	Right-handed alpha
Helix 21	AC3	A	367	377	Right-handed alpha
Helix 22	AC4	A	378	390	Right-handed alpha
Helix 23	AC5	A	399	404	Right-handed alpha
Helix 24	AC6	A	415	427	Right-handed alpha
Helix 25	AC7	A	428	431	Right-handed 310
Helix 26	AC8	A	433	444	Right-handed alpha
Helix 27	AC9	A	445	447	Right-handed 310
Helix 28	AD1	A	452	461	Right-handed alpha
Helix 29	AD2	A	475	479	Right-handed 310
Helix 30	AD3	A	480	506	Right-handed alpha
Helix 31	AD4	A	525	540	Right-handed alpha
Helix 32	AD5	A	547	563	Right-handed alpha
Helix 33	AD6	A	571	588	Right-handed alpha
Helix 34	AD7	A	591	618	Right-handed alpha
Helix 35	AD8	A	633	637	Right-handed 310
Helix 36	AD9	A	639	662	Right-handed alpha
Helix 37	AE1	A	663	674	Right-handed alpha
Helix 38	AE2	A	676	695	Right-handed alpha
Helix 39	AE3	A	700	728	Right-handed alpha
Helix 40	AE4	A	728	735	Right-handed alpha
Helix 41	AE5	A	738	752	Right-handed alpha
Helix 42	AE6	B	148	161	Right-handed alpha
Helix 43	AE7	B	164	178	Right-handed alpha
Helix 44	AE8	B	180	192	Right-handed alpha
Helix 45	AE9	B	194	199	Right-handed alpha
Helix 46	AF1	B	200	219	Right-handed alpha
Helix 47	AF2	B	228	250	Right-handed alpha
Helix 48	AF3	B	251	270	Right-handed alpha
Helix 49	AF4	B	276	304	Right-handed alpha
Helix 50	AF5	B	305	326	Right-handed alpha
Helix 51	AF6	B	336	363	Right-handed alpha
Helix 52	AF7	B	367	377	Right-handed alpha
Helix 53	AF8	B	378	390	Right-handed alpha
Helix 54	AF9	B	399	404	Right-handed alpha
Helix 55	AG1	B	415	426	Right-handed alpha
Helix 56	AG2	B	433	444	Right-handed alpha
Helix 57	AG3	B	445	447	Right-handed 310
Helix 58	AG4	B	452	461	Right-handed alpha
Helix 59	AG5	B	475	479	Right-handed 310
Helix 60	AG6	B	480	505	Right-handed alpha
Helix 61	AG7	B	525	540	Right-handed alpha
Helix 62	AG8	B	547	563	Right-handed alpha
Helix 63	AG9	B	571	588	Right-handed alpha
Helix 64	AH1	B	591	618	Right-handed alpha
Helix 65	AH2	B	633	637	Right-handed 310
Helix 66	AH3	B	639	662	Right-handed alpha
Helix 67	AH4	B	663	674	Right-handed alpha
Helix 68	AH5	B	676	696	Right-handed alpha
Helix 69	AH6	B	700	728	Right-handed alpha
Helix 70	AH7	B	728	735	Right-handed alpha
Helix 71	AH8	B	738	752	Right-handed alpha
Helix 72	AH9	H	31	33	Right-handed 310
Helix 73	AI1	H	90	94	Right-handed 310
Helix 74	AI2	H	175	177	Right-handed 310
Helix 75	AI3	H	206	208	Right-handed 310
Helix 76	AI4	H	220	223	Right-handed 310
Helix 77	AI5	L	80	84	Right-handed 310
Helix 78	AI6	L	122	129	Right-handed alpha
Helix 79	AI7	L	184	188	Right-handed alpha
Helix 80	AI8	K	90	94	Right-handed 310
Helix 81	AI9	K	175	177	Right-handed 310
Helix 82	AJ1	K	206	208	Right-handed 310
Helix 83	AJ2	K	220	223	Right-handed 310
Helix 84	AJ3	M	80	84	Right-handed 310
Helix 85	AJ4	M	122	129	Right-handed alpha
Helix 86	AJ5	M	184	188	Right-handed alpha

There are 24 sheets in PDB entry 7MNL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	6	10	first strand
Strand 2	H	21	28	anti-parallel
Strand 3	H	81	86	anti-parallel
Strand 4	H	72	76	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	13	15	first strand
Strand 2	H	126	130	parallel
Strand 3	H	95	103	anti-parallel
Strand 4	H	35	42	anti-parallel
Strand 5	H	49	54	anti-parallel
Strand 6	H	61	63	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	13	15	first strand
Strand 2	H	126	130	parallel
Strand 3	H	95	103	anti-parallel
Strand 4	H	121	122	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	107	110	first strand
Strand 2	H	113	116	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	139	143	first strand
Strand 2	H	154	164	anti-parallel
Strand 3	H	195	204	anti-parallel
Strand 4	H	182	184	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	139	143	first strand
Strand 2	H	154	164	anti-parallel
Strand 3	H	195	204	anti-parallel
Strand 4	H	188	189	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	170	173	first strand
Strand 2	H	214	219	anti-parallel
Strand 3	H	224	229	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	5	8	first strand
Strand 2	L	20	26	anti-parallel
Strand 3	L	71	76	anti-parallel
Strand 4	L	63	68	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	11	14	first strand
Strand 2	L	103	107	parallel
Strand 3	L	86	93	anti-parallel
Strand 4	L	34	39	anti-parallel
Strand 5	L	45	50	anti-parallel
Strand 6	L	54	55	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	11	14	first strand
Strand 2	L	103	107	parallel
Strand 3	L	86	93	anti-parallel
Strand 4	L	96	99	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	115	119	first strand
Strand 2	L	130	140	anti-parallel
Strand 3	L	174	183	anti-parallel
Strand 4	L	160	164	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	155	156	first strand
Strand 2	L	146	151	anti-parallel
Strand 3	L	192	198	anti-parallel
Strand 4	L	206	211	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	6	10	first strand
Strand 2	K	21	28	anti-parallel
Strand 3	K	81	86	anti-parallel
Strand 4	K	71	76	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	13	15	first strand
Strand 2	K	126	130	parallel
Strand 3	K	95	103	anti-parallel
Strand 4	K	35	42	anti-parallel
Strand 5	K	49	54	anti-parallel
Strand 6	K	61	63	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	13	15	first strand
Strand 2	K	126	130	parallel
Strand 3	K	95	103	anti-parallel
Strand 4	K	121	122	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	107	110	first strand
Strand 2	K	113	116	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	139	143	first strand
Strand 2	K	154	164	anti-parallel
Strand 3	K	195	204	anti-parallel
Strand 4	K	182	184	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	139	143	first strand
Strand 2	K	154	164	anti-parallel
Strand 3	K	195	204	anti-parallel
Strand 4	K	188	189	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	170	173	first strand
Strand 2	K	213	219	anti-parallel
Strand 3	K	224	230	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	5	8	first strand
Strand 2	M	20	26	anti-parallel
Strand 3	M	71	76	anti-parallel
Strand 4	M	63	68	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	11	14	first strand
Strand 2	M	103	107	parallel
Strand 3	M	86	93	anti-parallel
Strand 4	M	34	39	anti-parallel
Strand 5	M	45	50	anti-parallel
Strand 6	M	54	55	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	11	14	first strand
Strand 2	M	103	107	parallel
Strand 3	M	86	93	anti-parallel
Strand 4	M	96	99	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	115	119	first strand
Strand 2	M	130	140	anti-parallel
Strand 3	M	174	183	anti-parallel
Strand 4	M	160	164	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	155	156	first strand
Strand 2	M	146	151	anti-parallel
Strand 3	M	192	198	anti-parallel
Strand 4	M	206	211	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MNL

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MNL