Analysis of interatomic Contacts of Structural Units in PDB entry:
7MNT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MNT entry

There are 4 chains in PDB entry 7MNT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 8ALA 208
B
 MET 1597LYS 1634
C
 PRO 7ALA 208
D
 MET 1597LYS 1634
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7MNT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 29Right-handed alpha
Helix 2
AA2
A
30 36Right-handed alpha
Helix 3
AA3
A
76 81Right-handed alpha
Helix 4
AA4
A
94 100Right-handed alpha
Helix 5
AA5
A
100 113Right-handed alpha
Helix 6
AA6
A
132 136Right-handed 310
Helix 7
AA7
A
150 154Right-handed 310
Helix 8
AA8
A
157 170Right-handed alpha
Helix 9
AA9
A
190 208Right-handed alpha
Helix 10
AB1
C
22 29Right-handed alpha
Helix 11
AB2
C
30 36Right-handed alpha
Helix 12
AB3
C
77 81Right-handed 310
Helix 13
AB4
C
94 100Right-handed alpha
Helix 14
AB5
C
100 113Right-handed alpha
Helix 15
AB6
C
137 143Right-handed alpha
Helix 16
AB7
C
150 154Right-handed 310
Helix 17
AB8
C
157 170Right-handed alpha
Helix 18
AB9
C
190 207Right-handed alpha
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There are 4 sheets in PDB entry 7MNT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
45 54anti-parallel
Strand 3
A
57 66anti-parallel
Strand 4
A
9 17parallel
Strand 5
A
85 91parallel
Strand 6
A
117 122parallel
Strand 7
A
144 148parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1610 1611first strand
Strand 2
B
1618 1619anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 40first strand
Strand 2
C
45 54anti-parallel
Strand 3
C
57 66anti-parallel
Strand 4
C
9 17parallel
Strand 5
C
85 91parallel
Strand 6
C
117 122parallel
Strand 7
C
145 148parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1610 1611first strand
Strand 2
D
1618 1619anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il