Analysis of interatomic Contacts of Structural Units in PDB entry:
7MNW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MNW entry

There are 4 chains in PDB entry 7MNW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 7	LEU 216
B	PHE 1172	LYS 1306
C	GLN 8	LEU 216
D	PHE 1172	MET 1234

There are 37 helices in PDB entry 7MNW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	22	33	Right-handed alpha
Helix 2	AA2	A	69	74	Right-handed 310
Helix 3	AA3	A	75	80	Right-handed alpha
Helix 4	AA4	A	94	100	Right-handed alpha
Helix 5	AA5	A	100	113	Right-handed alpha
Helix 6	AA6	A	137	142	Right-handed alpha
Helix 7	AA7	A	158	170	Right-handed alpha
Helix 8	AA8	A	193	207	Right-handed alpha
Helix 9	AA9	B	1287	1303	Right-handed alpha
Helix 10	AB1	C	22	33	Right-handed alpha
Helix 11	AB2	C	69	74	Right-handed 310
Helix 12	AB3	C	75	80	Right-handed alpha
Helix 13	AB4	C	94	100	Right-handed alpha
Helix 14	AB5	C	100	113	Right-handed alpha
Helix 15	AB6	C	132	136	Right-handed 310
Helix 16	AB7	C	137	143	Right-handed alpha
Helix 17	AB8	C	158	170	Right-handed alpha
Helix 18	AB9	C	190	207	Right-handed alpha
Helix 19	AC1	D	1287	1304	Right-handed alpha
Helix 20	AC2	E	22	33	Right-handed alpha
Helix 21	AC3	E	69	74	Right-handed 310
Helix 22	AC4	E	75	80	Right-handed alpha
Helix 23	AC5	E	94	100	Right-handed alpha
Helix 24	AC6	E	100	113	Right-handed alpha
Helix 25	AC7	E	137	143	Right-handed alpha
Helix 26	AC8	E	158	170	Right-handed alpha
Helix 27	AC9	E	193	207	Right-handed alpha
Helix 28	AD1	F	1287	1303	Right-handed alpha
Helix 29	AD2	G	22	33	Right-handed alpha
Helix 30	AD3	G	69	74	Right-handed 310
Helix 31	AD4	G	75	80	Right-handed alpha
Helix 32	AD5	G	94	100	Right-handed alpha
Helix 33	AD6	G	100	113	Right-handed alpha
Helix 34	AD7	G	137	143	Right-handed alpha
Helix 35	AD8	G	158	170	Right-handed alpha
Helix 36	AD9	G	190	207	Right-handed alpha
Helix 37	AE1	H	1287	1304	Right-handed alpha

There are 8 sheets in PDB entry 7MNW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	54	first strand
Strand 2	A	57	66	anti-parallel
Strand 3	A	9	17	parallel
Strand 4	A	85	91	parallel
Strand 5	A	117	122	parallel
Strand 6	A	145	148	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1242	1247	first strand
Strand 2	B	1230	1235	anti-parallel
Strand 3	B	1210	1224	anti-parallel
Strand 4	B	1191	1205	anti-parallel
Strand 5	B	1277	1284	anti-parallel
Strand 6	B	1263	1270	anti-parallel
Strand 7	B	1255	1256	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	54	first strand
Strand 2	C	57	66	anti-parallel
Strand 3	C	10	17	parallel
Strand 4	C	85	91	parallel
Strand 5	C	117	122	parallel
Strand 6	C	145	148	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1242	1247	first strand
Strand 2	D	1230	1235	anti-parallel
Strand 3	D	1210	1224	anti-parallel
Strand 4	D	1191	1205	anti-parallel
Strand 5	D	1277	1284	anti-parallel
Strand 6	D	1263	1270	anti-parallel
Strand 7	D	1255	1256	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	45	54	first strand
Strand 2	E	57	66	anti-parallel
Strand 3	E	9	17	parallel
Strand 4	E	85	91	parallel
Strand 5	E	117	122	parallel
Strand 6	E	145	148	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1242	1247	first strand
Strand 2	F	1230	1235	anti-parallel
Strand 3	F	1210	1224	anti-parallel
Strand 4	F	1191	1205	anti-parallel
Strand 5	F	1277	1284	anti-parallel
Strand 6	F	1263	1270	anti-parallel
Strand 7	F	1255	1256	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	54	first strand
Strand 2	G	57	66	anti-parallel
Strand 3	G	9	17	parallel
Strand 4	G	85	91	parallel
Strand 5	G	117	122	parallel
Strand 6	G	145	148	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1242	1247	first strand
Strand 2	H	1230	1235	anti-parallel
Strand 3	H	1210	1224	anti-parallel
Strand 4	H	1191	1205	anti-parallel
Strand 5	H	1277	1284	anti-parallel
Strand 6	H	1263	1270	anti-parallel
Strand 7	H	1255	1256	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MNW

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MNW