Analysis of interatomic Contacts of Structural Units in PDB entry:
7MNY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MNY entry

There are 4 chains in PDB entry 7MNY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 7	LEU 216
B	PRO 2313	GLN 2441
C	PRO 7	LEU 216
D	PHE 2308	MET 2388

There are 56 helices in PDB entry 7MNY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	22	33	Right-handed alpha
Helix 2	AA2	A	69	73	Right-handed 310
Helix 3	AA3	A	75	80	Right-handed alpha
Helix 4	AA4	A	94	100	Right-handed alpha
Helix 5	AA5	A	100	113	Right-handed alpha
Helix 6	AA6	A	132	136	Right-handed 310
Helix 7	AA7	A	158	170	Right-handed alpha
Helix 8	AA8	A	190	207	Right-handed alpha
Helix 9	AA9	B	2423	2441	Right-handed alpha
Helix 10	AB1	C	22	33	Right-handed alpha
Helix 11	AB2	C	69	71	Right-handed 310
Helix 12	AB3	C	72	81	Right-handed alpha
Helix 13	AB4	C	94	100	Right-handed alpha
Helix 14	AB5	C	100	113	Right-handed alpha
Helix 15	AB6	C	158	170	Right-handed alpha
Helix 16	AB7	C	190	205	Right-handed alpha
Helix 17	AB8	C	209	213	Right-handed 310
Helix 18	AB9	D	2423	2440	Right-handed alpha
Helix 19	AC1	E	22	33	Right-handed alpha
Helix 20	AC2	E	75	80	Right-handed alpha
Helix 21	AC3	E	94	100	Right-handed alpha
Helix 22	AC4	E	100	113	Right-handed alpha
Helix 23	AC5	E	135	141	Right-handed alpha
Helix 24	AC6	E	158	170	Right-handed alpha
Helix 25	AC7	E	190	207	Right-handed alpha
Helix 26	AC8	F	2423	2440	Right-handed alpha
Helix 27	AC9	G	22	33	Right-handed alpha
Helix 28	AD1	G	69	73	Right-handed 310
Helix 29	AD2	G	74	75	Right-handed 310
Helix 30	AD3	G	76	81	Right-handed alpha
Helix 31	AD4	G	94	100	Right-handed alpha
Helix 32	AD5	G	100	113	Right-handed alpha
Helix 33	AD6	G	132	136	Right-handed 310
Helix 34	AD7	G	137	142	Right-handed alpha
Helix 35	AD8	G	158	170	Right-handed alpha
Helix 36	AD9	G	190	205	Right-handed alpha
Helix 37	AE1	H	2423	2441	Right-handed alpha
Helix 38	AE2	I	22	33	Right-handed alpha
Helix 39	AE3	I	69	73	Right-handed 310
Helix 40	AE4	I	75	80	Right-handed alpha
Helix 41	AE5	I	94	100	Right-handed alpha
Helix 42	AE6	I	100	112	Right-handed alpha
Helix 43	AE7	I	132	136	Right-handed 310
Helix 44	AE8	I	158	170	Right-handed alpha
Helix 45	AE9	I	190	205	Right-handed alpha
Helix 46	AF1	J	2423	2441	Right-handed alpha
Helix 47	AF2	K	22	33	Right-handed alpha
Helix 48	AF3	K	69	73	Right-handed 310
Helix 49	AF4	K	94	100	Right-handed alpha
Helix 50	AF5	K	100	113	Right-handed alpha
Helix 51	AF6	K	132	136	Right-handed 310
Helix 52	AF7	K	137	142	Right-handed alpha
Helix 53	AF8	K	158	170	Right-handed alpha
Helix 54	AF9	K	190	207	Right-handed alpha
Helix 55	AG1	K	211	215	Right-handed 310
Helix 56	AG2	L	2423	2441	Right-handed alpha

There are 12 sheets in PDB entry 7MNY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	54	first strand
Strand 2	A	57	66	anti-parallel
Strand 3	A	9	17	parallel
Strand 4	A	85	91	parallel
Strand 5	A	117	122	parallel
Strand 6	A	144	148	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2378	2383	first strand
Strand 2	B	2366	2371	anti-parallel
Strand 3	B	2346	2360	anti-parallel
Strand 4	B	2327	2341	anti-parallel
Strand 5	B	2413	2420	anti-parallel
Strand 6	B	2399	2406	anti-parallel
Strand 7	B	2391	2392	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	54	first strand
Strand 2	C	57	66	anti-parallel
Strand 3	C	9	17	parallel
Strand 4	C	85	91	parallel
Strand 5	C	117	122	parallel
Strand 6	C	144	148	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2378	2383	first strand
Strand 2	D	2366	2371	anti-parallel
Strand 3	D	2346	2360	anti-parallel
Strand 4	D	2327	2341	anti-parallel
Strand 5	D	2413	2420	anti-parallel
Strand 6	D	2396	2406	anti-parallel
Strand 7	D	2391	2393	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	45	54	first strand
Strand 2	E	57	66	anti-parallel
Strand 3	E	9	17	parallel
Strand 4	E	85	91	parallel
Strand 5	E	117	122	parallel
Strand 6	E	144	148	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2378	2383	first strand
Strand 2	F	2366	2371	anti-parallel
Strand 3	F	2346	2360	anti-parallel
Strand 4	F	2327	2341	anti-parallel
Strand 5	F	2413	2420	anti-parallel
Strand 6	F	2399	2406	anti-parallel
Strand 7	F	2391	2392	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	54	first strand
Strand 2	G	57	66	anti-parallel
Strand 3	G	9	17	parallel
Strand 4	G	85	91	parallel
Strand 5	G	117	122	parallel
Strand 6	G	145	148	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	2378	2383	first strand
Strand 2	H	2366	2371	anti-parallel
Strand 3	H	2346	2360	anti-parallel
Strand 4	H	2327	2341	anti-parallel
Strand 5	H	2413	2420	anti-parallel
Strand 6	H	2396	2406	anti-parallel
Strand 7	H	2391	2393	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	45	54	first strand
Strand 2	I	57	66	anti-parallel
Strand 3	I	9	17	parallel
Strand 4	I	85	91	parallel
Strand 5	I	117	122	parallel
Strand 6	I	146	148	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	2378	2383	first strand
Strand 2	J	2366	2371	anti-parallel
Strand 3	J	2346	2360	anti-parallel
Strand 4	J	2327	2341	anti-parallel
Strand 5	J	2413	2420	anti-parallel
Strand 6	J	2399	2406	anti-parallel
Strand 7	J	2391	2392	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	45	54	first strand
Strand 2	K	57	66	anti-parallel
Strand 3	K	9	17	parallel
Strand 4	K	85	91	parallel
Strand 5	K	117	122	parallel
Strand 6	K	145	148	parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	2378	2383	first strand
Strand 2	L	2366	2371	anti-parallel
Strand 3	L	2346	2360	anti-parallel
Strand 4	L	2327	2341	anti-parallel
Strand 5	L	2413	2420	anti-parallel
Strand 6	L	2399	2406	anti-parallel
Strand 7	L	2391	2392	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MNY

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MNY