Analysis of interatomic Contacts of Structural Units in PDB entry:
7MNZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MNZ entry

There are 4 chains in PDB entry 7MNZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 6	ASP 211
B	GLY 2907	LEU 3044
C	PRO 7	ASP 211
D	GLY 2907	ARG 2974

There are 57 helices in PDB entry 7MNZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	22	33	Right-handed alpha
Helix 2	AA2	A	69	73	Right-handed 310
Helix 3	AA3	A	75	81	Right-handed 310
Helix 4	AA4	A	94	100	Right-handed alpha
Helix 5	AA5	A	100	113	Right-handed alpha
Helix 6	AA6	A	137	143	Right-handed alpha
Helix 7	AA7	A	158	170	Right-handed alpha
Helix 8	AA8	A	193	205	Right-handed alpha
Helix 9	AA9	B	3026	3043	Right-handed alpha
Helix 10	AB1	C	22	33	Right-handed alpha
Helix 11	AB2	C	69	73	Right-handed 310
Helix 12	AB3	C	76	81	Right-handed alpha
Helix 13	AB4	C	94	100	Right-handed alpha
Helix 14	AB5	C	100	113	Right-handed alpha
Helix 15	AB6	C	132	136	Right-handed 310
Helix 16	AB7	C	137	142	Right-handed alpha
Helix 17	AB8	C	158	170	Right-handed alpha
Helix 18	AB9	C	193	205	Right-handed alpha
Helix 19	AC1	D	3026	3043	Right-handed alpha
Helix 20	AC2	E	22	33	Right-handed alpha
Helix 21	AC3	E	69	73	Right-handed 310
Helix 22	AC4	E	75	81	Right-handed 310
Helix 23	AC5	E	94	100	Right-handed alpha
Helix 24	AC6	E	100	113	Right-handed alpha
Helix 25	AC7	E	137	143	Right-handed alpha
Helix 26	AC8	E	158	170	Right-handed alpha
Helix 27	AC9	E	190	206	Right-handed alpha
Helix 28	AD1	F	3026	3043	Right-handed alpha
Helix 29	AD2	G	22	33	Right-handed alpha
Helix 30	AD3	G	69	73	Right-handed 310
Helix 31	AD4	G	75	81	Right-handed 310
Helix 32	AD5	G	94	100	Right-handed alpha
Helix 33	AD6	G	100	113	Right-handed alpha
Helix 34	AD7	G	137	143	Right-handed alpha
Helix 35	AD8	G	158	170	Right-handed alpha
Helix 36	AD9	G	190	192	Right-handed 310
Helix 37	AE1	G	193	207	Right-handed alpha
Helix 38	AE2	H	3026	3043	Right-handed alpha
Helix 39	AE3	I	22	33	Right-handed alpha
Helix 40	AE4	I	69	73	Right-handed 310
Helix 41	AE5	I	75	81	Right-handed 310
Helix 42	AE6	I	94	100	Right-handed alpha
Helix 43	AE7	I	100	112	Right-handed alpha
Helix 44	AE8	I	137	143	Right-handed alpha
Helix 45	AE9	I	158	170	Right-handed alpha
Helix 46	AF1	I	190	192	Right-handed 310
Helix 47	AF2	I	193	205	Right-handed alpha
Helix 48	AF3	J	3026	3043	Right-handed alpha
Helix 49	AF4	K	22	33	Right-handed alpha
Helix 50	AF5	K	69	73	Right-handed 310
Helix 51	AF6	K	75	81	Right-handed 310
Helix 52	AF7	K	94	100	Right-handed alpha
Helix 53	AF8	K	100	113	Right-handed alpha
Helix 54	AF9	K	137	142	Right-handed alpha
Helix 55	AG1	K	158	170	Right-handed alpha
Helix 56	AG2	K	193	206	Right-handed alpha
Helix 57	AG3	L	3026	3043	Right-handed alpha

There are 13 sheets in PDB entry 7MNZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	54	first strand
Strand 2	A	57	66	anti-parallel
Strand 3	A	9	17	parallel
Strand 4	A	85	91	parallel
Strand 5	A	117	122	parallel
Strand 6	A	145	148	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2981	2986	first strand
Strand 2	B	2969	2975	anti-parallel
Strand 3	B	2949	2963	anti-parallel
Strand 4	B	2930	2944	anti-parallel
Strand 5	B	3016	3024	anti-parallel
Strand 6	B	3002	3009	anti-parallel
Strand 7	B	2994	2995	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	54	first strand
Strand 2	C	57	66	anti-parallel
Strand 3	C	10	17	parallel
Strand 4	C	85	91	parallel
Strand 5	C	117	122	parallel
Strand 6	C	145	148	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2909	2917	first strand
Strand 2	H	2909	2917	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2981	2986	first strand
Strand 2	D	2969	2974	anti-parallel
Strand 3	D	2949	2963	anti-parallel
Strand 4	D	2930	2944	anti-parallel
Strand 5	D	3016	3024	anti-parallel
Strand 6	D	3002	3009	anti-parallel
Strand 7	D	2994	2995	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	45	54	first strand
Strand 2	E	57	66	anti-parallel
Strand 3	E	9	17	parallel
Strand 4	E	85	91	parallel
Strand 5	E	117	122	parallel
Strand 6	E	145	148	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2981	2986	first strand
Strand 2	F	2969	2975	anti-parallel
Strand 3	F	2949	2963	anti-parallel
Strand 4	F	2930	2944	anti-parallel
Strand 5	F	3016	3023	anti-parallel
Strand 6	F	3002	3009	anti-parallel
Strand 7	F	2994	2995	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	54	first strand
Strand 2	G	57	66	anti-parallel
Strand 3	G	10	17	parallel
Strand 4	G	85	91	parallel
Strand 5	G	117	122	parallel
Strand 6	G	145	148	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	2981	2986	first strand
Strand 2	H	2969	2974	anti-parallel
Strand 3	H	2949	2963	anti-parallel
Strand 4	H	2930	2944	anti-parallel
Strand 5	H	3016	3023	anti-parallel
Strand 6	H	3002	3009	anti-parallel
Strand 7	H	2994	2995	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	45	54	first strand
Strand 2	I	57	66	anti-parallel
Strand 3	I	10	17	parallel
Strand 4	I	85	91	parallel
Strand 5	I	117	122	parallel
Strand 6	I	145	148	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	2981	2986	first strand
Strand 2	J	2969	2974	anti-parallel
Strand 3	J	2949	2963	anti-parallel
Strand 4	J	2930	2944	anti-parallel
Strand 5	J	3016	3023	anti-parallel
Strand 6	J	3002	3009	anti-parallel
Strand 7	J	2994	2995	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	45	54	first strand
Strand 2	K	57	66	anti-parallel
Strand 3	K	10	17	parallel
Strand 4	K	85	91	parallel
Strand 5	K	117	122	parallel
Strand 6	K	145	148	parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	2981	2986	first strand
Strand 2	L	2969	2974	anti-parallel
Strand 3	L	2949	2963	anti-parallel
Strand 4	L	2930	2944	anti-parallel
Strand 5	L	3016	3023	anti-parallel
Strand 6	L	3002	3009	anti-parallel
Strand 7	L	2994	2995	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MNZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MNZ