Analysis of interatomic Contacts of Structural Units in PDB entry:
7MO8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MO8 entry

There are 2 chains in PDB entry 7MO8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 34	THR 722
B	CYS 26	TYR 654

There are 21 helices in PDB entry 7MO8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	38	42	Right-handed 310
Helix 2	AA2	A	66	76	Right-handed alpha
Helix 3	AA3	A	122	127	Right-handed alpha
Helix 4	AA4	A	162	167	Right-handed alpha
Helix 5	AA5	A	205	209	Right-handed 310
Helix 6	AA6	A	395	399	Right-handed 310
Helix 7	AA7	A	414	426	Right-handed alpha
Helix 8	AA8	A	534	536	Right-handed 310
Helix 9	AA9	A	638	646	Right-handed alpha
Helix 10	AB1	A	709	711	Right-handed 310
Helix 11	AB2	A	712	721	Right-handed alpha
Helix 12	AB3	B	27	34	Right-handed 310
Helix 13	AB4	B	202	206	Right-handed 310
Helix 14	AB5	B	240	244	Right-handed 310
Helix 15	AB6	B	326	334	Right-handed alpha
Helix 16	AB7	B	367	376	Right-handed alpha
Helix 17	AB8	B	386	391	Right-handed alpha
Helix 18	AB9	B	496	498	Right-handed 310
Helix 19	AC1	B	525	532	Right-handed alpha
Helix 20	AC2	B	547	551	Right-handed 310
Helix 21	AC3	B	613	617	Right-handed 310

There are 24 sheets in PDB entry 7MO8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	49	52	first strand
Strand 2	A	108	111	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	63	first strand
Strand 2	A	95	99	anti-parallel
Strand 3	A	86	90	anti-parallel
Strand 4	A	116	120	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	188	189	first strand
Strand 2	A	199	200	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	270	272	first strand
Strand 2	A	280	282	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	364	365	first strand
Strand 2	A	375	376	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	451	453	first strand
Strand 2	A	461	463	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	499	500	first strand
Strand 2	A	630	636	anti-parallel
Strand 3	A	612	616	anti-parallel
Strand 4	A	676	680	anti-parallel
Strand 5	A	685	690	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	499	500	first strand
Strand 2	A	630	636	anti-parallel
Strand 3	A	656	660	anti-parallel
Strand 4	A	704	707	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	563	565	first strand
Strand 2	A	546	548	anti-parallel
Strand 3	A	508	513	anti-parallel
Strand 4	A	516	525	anti-parallel
Strand 5	A	528	532	anti-parallel
Strand 6	A	579	584	anti-parallel
Strand 7	A	567	572	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	47	first strand
Strand 2	B	509	514	anti-parallel
Strand 3	B	499	506	anti-parallel
Strand 4	B	486	495	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	57	first strand
Strand 2	B	61	66	anti-parallel
Strand 3	B	69	74	anti-parallel
Strand 4	B	80	85	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	90	first strand
Strand 2	B	112	113	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	120	123	first strand
Strand 2	B	129	133	anti-parallel
Strand 3	B	141	145	anti-parallel
Strand 4	B	159	160	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	189	first strand
Strand 2	B	192	200	anti-parallel
Strand 3	B	214	219	anti-parallel
Strand 4	B	226	227	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	189	first strand
Strand 2	B	192	200	anti-parallel
Strand 3	B	214	219	anti-parallel
Strand 4	B	234	235	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	248	252	first strand
Strand 2	B	261	265	anti-parallel
Strand 3	B	275	280	anti-parallel
Strand 4	B	292	300	anti-parallel
Strand 5	B	418	419	parallel
Strand 6	B	384	385	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	312	314	first strand
Strand 2	B	292	300	anti-parallel
Strand 3	B	424	427	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	316	323	first strand
Strand 2	B	341	349	anti-parallel
Strand 3	B	356	366	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	439	441	first strand
Strand 2	B	456	457	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	444	447	first strand
Strand 2	B	450	453	anti-parallel
Strand 3	B	465	467	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	539	540	first strand
Strand 2	B	545	546	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	564	569	first strand
Strand 2	B	581	586	anti-parallel
Strand 3	B	621	624	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	590	591	first strand
Strand 2	B	596	597	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	608	609	first strand
Strand 2	B	602	605	anti-parallel
Strand 3	B	638	641	anti-parallel
Strand 4	B	646	649	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MO8

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MO8