Analysis of interatomic Contacts of Structural Units in PDB entry:
7MOB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MOB entry

There are 4 chains in PDB entry 7MOB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 37	GLU 208
B	ASN 37	GLU 208
C	SER 33	THR 557
D	SER 33	THR 557

There are 18 helices in PDB entry 7MOB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	37	41	Right-handed 310
Helix 2	AA2	A	66	76	Right-handed alpha
Helix 3	AA3	B	37	41	Right-handed 310
Helix 4	AA4	B	66	76	Right-handed alpha
Helix 5	AA5	C	238	243	Right-handed alpha
Helix 6	AA6	C	326	333	Right-handed alpha
Helix 7	AA7	C	367	376	Right-handed alpha
Helix 8	AA8	C	386	391	Right-handed alpha
Helix 9	AA9	C	395	399	Right-handed 310
Helix 10	AB1	C	525	531	Right-handed alpha
Helix 11	AB2	C	532	537	Right-handed 310
Helix 12	AB3	D	238	243	Right-handed alpha
Helix 13	AB4	D	326	333	Right-handed alpha
Helix 14	AB5	D	367	376	Right-handed alpha
Helix 15	AB6	D	386	391	Right-handed alpha
Helix 16	AB7	D	395	399	Right-handed 310
Helix 17	AB8	D	525	531	Right-handed alpha
Helix 18	AB9	D	532	537	Right-handed 310

There are 26 sheets in PDB entry 7MOB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	45	first strand
Strand 2	A	116	120	anti-parallel
Strand 3	A	86	90	anti-parallel
Strand 4	A	95	99	anti-parallel
Strand 5	A	60	63	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	52	first strand
Strand 2	A	108	112	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	188	189	first strand
Strand 2	A	199	200	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	45	first strand
Strand 2	B	116	120	anti-parallel
Strand 3	B	86	90	anti-parallel
Strand 4	B	95	99	anti-parallel
Strand 5	B	60	63	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	52	first strand
Strand 2	B	108	112	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	188	189	first strand
Strand 2	B	199	200	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	47	first strand
Strand 2	C	509	514	anti-parallel
Strand 3	C	499	506	anti-parallel
Strand 4	C	486	495	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	58	first strand
Strand 2	C	61	66	anti-parallel
Strand 3	C	69	74	anti-parallel
Strand 4	C	80	85	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	89	90	first strand
Strand 2	C	112	113	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	117	123	first strand
Strand 2	C	129	134	anti-parallel
Strand 3	C	142	144	anti-parallel
Strand 4	C	159	160	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	182	189	first strand
Strand 2	C	192	199	anti-parallel
Strand 3	C	214	219	anti-parallel
Strand 4	C	226	227	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	182	189	first strand
Strand 2	C	192	199	anti-parallel
Strand 3	C	214	219	anti-parallel
Strand 4	C	234	235	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	247	255	first strand
Strand 2	C	258	266	anti-parallel
Strand 3	C	274	282	anti-parallel
Strand 4	C	292	300	anti-parallel
Strand 5	C	418	419	parallel
Strand 6	C	384	385	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	312	313	first strand
Strand 2	C	292	300	anti-parallel
Strand 3	C	424	426	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	316	323	first strand
Strand 2	C	341	349	anti-parallel
Strand 3	C	356	366	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	444	447	first strand
Strand 2	C	450	455	anti-parallel
Strand 3	C	461	466	anti-parallel
Strand 4	C	477	480	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	45	47	first strand
Strand 2	D	509	514	anti-parallel
Strand 3	D	499	506	anti-parallel
Strand 4	D	486	495	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	52	58	first strand
Strand 2	D	61	66	anti-parallel
Strand 3	D	69	74	anti-parallel
Strand 4	D	80	85	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	89	90	first strand
Strand 2	D	112	113	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	117	123	first strand
Strand 2	D	129	134	anti-parallel
Strand 3	D	142	144	anti-parallel
Strand 4	D	159	160	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	182	189	first strand
Strand 2	D	192	199	anti-parallel
Strand 3	D	214	219	anti-parallel
Strand 4	D	226	227	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	182	189	first strand
Strand 2	D	192	199	anti-parallel
Strand 3	D	214	219	anti-parallel
Strand 4	D	234	235	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	247	255	first strand
Strand 2	D	258	266	anti-parallel
Strand 3	D	274	282	anti-parallel
Strand 4	D	292	300	anti-parallel
Strand 5	D	418	419	parallel
Strand 6	D	384	385	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	312	313	first strand
Strand 2	D	292	300	anti-parallel
Strand 3	D	424	426	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	316	323	first strand
Strand 2	D	341	349	anti-parallel
Strand 3	D	356	366	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	444	447	first strand
Strand 2	D	450	455	anti-parallel
Strand 3	D	461	466	anti-parallel
Strand 4	D	477	480	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MOB

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MOB