Analysis of interatomic Contacts of Structural Units in PDB entry:
7MP9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MP9 entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 3 chains in PDB entry 7MP9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 121GLN 204
A
 ASN 206PHE 529
A
 ARG 531GLU 568
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7MP9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
121 155Right-handed alpha
Helix 2
AA2
A
158 160Right-handed 310
Helix 3
AA3
A
206 218Right-handed alpha
Helix 4
AA4
A
232 239Right-handed alpha
Helix 5
AA5
A
301 305Right-handed alpha
Helix 6
AA6
A
310 331Right-handed alpha
Helix 7
AA7
A
339 341Right-handed 310
Helix 8
AA8
A
390 395Right-handed alpha
Helix 9
AA9
A
408 422Right-handed alpha
Helix 10
AB1
A
452 463Right-handed alpha
Helix 11
AB2
A
466 470Right-handed 310
Helix 12
AB3
A
472 486Right-handed alpha
Helix 13
AB4
A
487 492Right-handed 310
Helix 14
AB5
A
499 517Right-handed alpha
Helix 15
AB6
A
522 526Right-handed 310
Helix 16
AB7
A
532 535Right-handed 310
Helix 17
AB8
A
536 548Right-handed alpha
Helix 18
AB9
A
551 565Right-handed alpha
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There are 3 sheets in PDB entry 7MP9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 170first strand
Strand 2
A
175 181anti-parallel
Strand 3
A
193 199anti-parallel
Strand 4
A
289 295anti-parallel
Strand 5
A
253 259anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 300first strand
Strand 2
A
343 346anti-parallel
Strand 3
A
354 357anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 374first strand
Strand 2
A
403 405anti-parallel
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