Analysis of interatomic Contacts of Structural Units in PDB entry:
7MPH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MPH entry

There are 6 chains in PDB entry 7MPH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 58PHE 147
B
 GLY 58ILE 151
C
 GLY 58GLU 152
D
 GLY 58GLU 152
E
 GLY 58GLU 152
F
 PRO 59GLU 152
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7MPH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
66 76Right-handed alpha
Helix 2
AA2
A
127 135Right-handed alpha
Helix 3
AA3
B
66 76Right-handed alpha
Helix 4
AA4
B
127 136Right-handed alpha
Helix 5
AA5
C
66 76Right-handed alpha
Helix 6
AA6
C
127 138Right-handed alpha
Helix 7
AA7
D
66 76Right-handed alpha
Helix 8
AA8
D
127 135Right-handed alpha
Helix 9
AA9
E
67 74Right-handed alpha
Helix 10
AB1
E
127 135Right-handed alpha
Helix 11
AB2
F
66 76Right-handed alpha
Helix 12
AB3
F
127 138Right-handed alpha
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There are 7 sheets in PDB entry 7MPH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 87first strand
Strand 2
A
95 101anti-parallel
Strand 3
A
104 112anti-parallel
Strand 4
A
118 119anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 87first strand
Strand 2
B
95 101anti-parallel
Strand 3
B
104 112anti-parallel
Strand 4
B
118 119anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
104 109first strand
Strand 2
C
95 101anti-parallel
Strand 3
C
83 87anti-parallel
Strand 4
D
60 63anti-parallel
Strand 5
C
60 63anti-parallel
Strand 6
D
83 87anti-parallel
Strand 7
D
95 101anti-parallel
Strand 8
D
104 112anti-parallel
Strand 9
D
118 119anti-parallel
Strand 10
D
124 125anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
111 112first strand
Strand 2
C
118 119anti-parallel
Strand 3
C
124 125anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
83 87first strand
Strand 2
E
95 101anti-parallel
Strand 3
E
104 112anti-parallel
Strand 4
E
118 119anti-parallel
Strand 5
E
124 125anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
83 87first strand
Strand 2
F
95 101anti-parallel
Strand 3
F
104 109anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
111 112first strand
Strand 2
F
118 119anti-parallel
Strand 3
F
124 125anti-parallel
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