Analysis of interatomic Contacts of Structural Units in PDB entry:
7MPQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MPQ entry

There are 7 chains in PDB entry 7MPQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 206
C
 THR 2SER 206
E
 THR 2SER 206
G
 THR 2SER 206
I
 THR 2SER 206
K
 THR 2SER 206
M
 GLU 3GLY 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 7MPQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 18Right-handed 310
Helix 2
AA2
A
62 71Right-handed alpha
Helix 3
AA3
A
80 93Right-handed alpha
Helix 4
AA4
A
102 110Right-handed alpha
Helix 5
AA5
A
117 127Right-handed alpha
Helix 6
AA6
A
145 155Right-handed alpha
Helix 7
AA7
A
158 173Right-handed alpha
Helix 8
AA8
A
175 196Right-handed alpha
Helix 9
AA9
C
62 71Right-handed alpha
Helix 10
AB1
C
80 93Right-handed alpha
Helix 11
AB2
C
102 110Right-handed alpha
Helix 12
AB3
C
117 127Right-handed alpha
Helix 13
AB4
C
145 158Right-handed alpha
Helix 14
AB5
C
158 173Right-handed alpha
Helix 15
AB6
C
175 196Right-handed alpha
Helix 16
AB7
E
14 18Right-handed 310
Helix 17
AB8
E
62 71Right-handed alpha
Helix 18
AB9
E
80 93Right-handed alpha
Helix 19
AC1
E
102 110Right-handed alpha
Helix 20
AC2
E
117 127Right-handed alpha
Helix 21
AC3
E
145 158Right-handed alpha
Helix 22
AC4
E
158 173Right-handed alpha
Helix 23
AC5
E
175 196Right-handed alpha
Helix 24
AC6
G
14 18Right-handed 310
Helix 25
AC7
G
62 71Right-handed alpha
Helix 26
AC8
G
80 93Right-handed alpha
Helix 27
AC9
G
102 110Right-handed alpha
Helix 28
AD1
G
117 127Right-handed alpha
Helix 29
AD2
G
145 158Right-handed alpha
Helix 30
AD3
G
158 173Right-handed alpha
Helix 31
AD4
G
175 196Right-handed alpha
Helix 32
AD5
I
14 18Right-handed 310
Helix 33
AD6
I
62 70Right-handed alpha
Helix 34
AD7
I
80 93Right-handed alpha
Helix 35
AD8
I
102 110Right-handed alpha
Helix 36
AD9
I
117 127Right-handed alpha
Helix 37
AE1
I
132 136Right-handed 310
Helix 38
AE2
I
145 155Right-handed alpha
Helix 39
AE3
I
158 173Right-handed alpha
Helix 40
AE4
I
175 196Right-handed alpha
Helix 41
AE5
K
14 18Right-handed 310
Helix 42
AE6
K
62 71Right-handed alpha
Helix 43
AE7
K
80 93Right-handed alpha
Helix 44
AE8
K
102 110Right-handed alpha
Helix 45
AE9
K
117 127Right-handed alpha
Helix 46
AF1
K
145 158Right-handed alpha
Helix 47
AF2
K
158 173Right-handed alpha
Helix 48
AF3
K
175 196Right-handed alpha
Helix 49
AF4
M
14 18Right-handed 310
Helix 50
AF5
M
62 71Right-handed alpha
Helix 51
AF6
M
80 93Right-handed alpha
Helix 52
AF7
M
102 110Right-handed alpha
Helix 53
AF8
M
117 126Right-handed alpha
Helix 54
AF9
M
145 158Right-handed alpha
Helix 55
AG1
M
158 173Right-handed alpha
Helix 56
AG2
M
175 196Right-handed alpha
Helix 57
AG3
O
14 18Right-handed 310
Helix 58
AG4
O
62 71Right-handed alpha
Helix 59
AG5
O
80 93Right-handed alpha
Helix 60
AG6
O
102 110Right-handed alpha
Helix 61
AG7
O
117 127Right-handed alpha
Helix 62
AG8
O
132 136Right-handed 310
Helix 63
AG9
O
145 155Right-handed alpha
Helix 64
AH1
O
158 174Right-handed alpha
Helix 65
AH2
O
175 196Right-handed alpha
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There are 8 sheets in PDB entry 7MPQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
A
50 54parallel
Strand 3
A
38 44anti-parallel
Strand 4
A
21 28anti-parallel
Strand 5
A
75 78parallel
Strand 6
A
99 101parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 8first strand
Strand 2
C
50 54parallel
Strand 3
C
38 44anti-parallel
Strand 4
C
21 28anti-parallel
Strand 5
C
75 78parallel
Strand 6
C
99 101parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
4 8first strand
Strand 2
E
50 54parallel
Strand 3
E
38 44anti-parallel
Strand 4
E
21 28anti-parallel
Strand 5
E
75 78parallel
Strand 6
E
99 101parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
4 8first strand
Strand 2
G
50 54parallel
Strand 3
G
38 44anti-parallel
Strand 4
G
21 28anti-parallel
Strand 5
G
75 78parallel
Strand 6
G
99 101parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
4 8first strand
Strand 2
I
50 54parallel
Strand 3
I
38 44anti-parallel
Strand 4
I
21 28anti-parallel
Strand 5
I
75 78parallel
Strand 6
I
99 101parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
4 8first strand
Strand 2
K
50 54parallel
Strand 3
K
38 44anti-parallel
Strand 4
K
21 28anti-parallel
Strand 5
K
75 78parallel
Strand 6
K
99 101parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
4 8first strand
Strand 2
M
50 54parallel
Strand 3
M
38 44anti-parallel
Strand 4
M
21 28anti-parallel
Strand 5
M
75 78parallel
Strand 6
M
99 101parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
4 8first strand
Strand 2
O
50 54parallel
Strand 3
O
38 44anti-parallel
Strand 4
O
21 28anti-parallel
Strand 5
O
75 78parallel
Strand 6
O
99 101parallel
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