Analysis of interatomic Contacts of Structural Units in PDB entry:
7MPT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MPT entry

There are 2 chains in PDB entry 7MPT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0SER 205
B
 MET 1SER 205
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7MPT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 17Right-handed 310
Helix 2
AA2
A
61 70Right-handed alpha
Helix 3
AA3
A
79 92Right-handed alpha
Helix 4
AA4
A
101 109Right-handed alpha
Helix 5
AA5
A
116 126Right-handed alpha
Helix 6
AA6
A
144 154Right-handed alpha
Helix 7
AA7
A
157 173Right-handed alpha
Helix 8
AA8
A
174 195Right-handed alpha
Helix 9
AA9
B
61 70Right-handed alpha
Helix 10
AB1
B
79 92Right-handed alpha
Helix 11
AB2
B
101 109Right-handed alpha
Helix 12
AB3
B
116 126Right-handed alpha
Helix 13
AB4
B
144 154Right-handed alpha
Helix 14
AB5
B
157 173Right-handed alpha
Helix 15
AB6
B
174 195Right-handed alpha
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There are 2 sheets in PDB entry 7MPT. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
49 53parallel
Strand 3
A
37 43anti-parallel
Strand 4
A
20 27anti-parallel
Strand 5
A
74 77parallel
Strand 6
A
98 100parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 7first strand
Strand 2
B
48 53parallel
Strand 3
B
37 43anti-parallel
Strand 4
B
20 27anti-parallel
Strand 5
B
74 77parallel
Strand 6
B
98 100parallel
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