Analysis of interatomic Contacts of Structural Units in PDB entry:
7MQC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MQC entry

There are 13 chains in PDB entry 7MQC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2SER 206
B
 G 603 G 604
C
 THR 2SER 206
D
 G 603 G 604
E
 THR 2SER 206
F
 G 603 G 604
G
 THR 2SER 206
H
 G 603 G 604
I
 THR 2SER 206
J
 G 603 G 604
K
 THR 2SER 206
L
 G 603 G 604
M
 THR 2ARG 82
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 7MQC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
62 71Right-handed alpha
Helix 2
AA2
A
80 93Right-handed alpha
Helix 3
AA3
A
102 110Right-handed alpha
Helix 4
AA4
A
117 127Right-handed alpha
Helix 5
AA5
A
145 157Right-handed alpha
Helix 6
AA6
A
158 173Right-handed alpha
Helix 7
AA7
A
175 196Right-handed alpha
Helix 8
AA8
C
62 71Right-handed alpha
Helix 9
AA9
C
80 93Right-handed alpha
Helix 10
AB1
C
102 110Right-handed alpha
Helix 11
AB2
C
117 127Right-handed alpha
Helix 12
AB3
C
145 157Right-handed alpha
Helix 13
AB4
C
158 173Right-handed alpha
Helix 14
AB5
C
175 196Right-handed alpha
Helix 15
AB6
E
62 71Right-handed alpha
Helix 16
AB7
E
80 93Right-handed alpha
Helix 17
AB8
E
102 110Right-handed alpha
Helix 18
AB9
E
117 127Right-handed alpha
Helix 19
AC1
E
145 157Right-handed alpha
Helix 20
AC2
E
158 174Right-handed alpha
Helix 21
AC3
E
175 196Right-handed alpha
Helix 22
AC4
G
62 71Right-handed alpha
Helix 23
AC5
G
80 93Right-handed alpha
Helix 24
AC6
G
102 110Right-handed alpha
Helix 25
AC7
G
117 127Right-handed alpha
Helix 26
AC8
G
145 155Right-handed alpha
Helix 27
AC9
G
158 173Right-handed alpha
Helix 28
AD1
G
175 196Right-handed alpha
Helix 29
AD2
I
62 70Right-handed alpha
Helix 30
AD3
I
80 93Right-handed alpha
Helix 31
AD4
I
102 110Right-handed alpha
Helix 32
AD5
I
117 127Right-handed alpha
Helix 33
AD6
I
132 136Right-handed 310
Helix 34
AD7
I
145 157Right-handed alpha
Helix 35
AD8
I
158 173Right-handed alpha
Helix 36
AD9
I
175 196Right-handed alpha
Helix 37
AE1
K
62 71Right-handed alpha
Helix 38
AE2
K
80 93Right-handed alpha
Helix 39
AE3
K
102 110Right-handed alpha
Helix 40
AE4
K
117 127Right-handed alpha
Helix 41
AE5
K
145 155Right-handed alpha
Helix 42
AE6
K
158 173Right-handed alpha
Helix 43
AE7
K
175 196Right-handed alpha
Helix 44
AE8
M
62 71Right-handed alpha
Helix 45
AE9
M
80 93Right-handed alpha
Helix 46
AF1
M
102 110Right-handed alpha
Helix 47
AF2
M
117 127Right-handed alpha
Helix 48
AF3
M
145 157Right-handed alpha
Helix 49
AF4
M
158 173Right-handed alpha
Helix 50
AF5
M
175 196Right-handed alpha
Helix 51
AF6
O
62 71Right-handed alpha
Helix 52
AF7
O
80 93Right-handed alpha
Helix 53
AF8
O
102 110Right-handed alpha
Helix 54
AF9
O
117 127Right-handed alpha
Helix 55
AG1
O
145 157Right-handed alpha
Helix 56
AG2
O
158 173Right-handed alpha
Helix 57
AG3
O
175 196Right-handed alpha
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There are 8 sheets in PDB entry 7MQC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
A
50 54parallel
Strand 3
A
38 44anti-parallel
Strand 4
A
21 28anti-parallel
Strand 5
A
75 78parallel
Strand 6
A
99 101parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 8first strand
Strand 2
C
50 54parallel
Strand 3
C
38 44anti-parallel
Strand 4
C
21 28anti-parallel
Strand 5
C
75 78parallel
Strand 6
C
99 101parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 8first strand
Strand 2
E
49 54parallel
Strand 3
E
38 44anti-parallel
Strand 4
E
21 28anti-parallel
Strand 5
E
75 78parallel
Strand 6
E
99 101parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
4 8first strand
Strand 2
G
50 54parallel
Strand 3
G
38 44anti-parallel
Strand 4
G
21 28anti-parallel
Strand 5
G
75 78parallel
Strand 6
G
99 101parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
3 8first strand
Strand 2
I
49 54parallel
Strand 3
I
38 44anti-parallel
Strand 4
I
21 28anti-parallel
Strand 5
I
75 78parallel
Strand 6
I
99 101parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
3 8first strand
Strand 2
K
49 54parallel
Strand 3
K
38 44anti-parallel
Strand 4
K
21 28anti-parallel
Strand 5
K
75 78parallel
Strand 6
K
99 101parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
4 8first strand
Strand 2
M
50 54parallel
Strand 3
M
38 44anti-parallel
Strand 4
M
21 28anti-parallel
Strand 5
M
75 78parallel
Strand 6
M
99 101parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
3 8first strand
Strand 2
O
49 54parallel
Strand 3
O
38 44anti-parallel
Strand 4
O
21 28anti-parallel
Strand 5
O
75 78parallel
Strand 6
O
99 101parallel
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