Analysis of interatomic Contacts of Structural Units in PDB entry:
7MQJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MQJ entry

There is 1 chain in PDB entry 7MQJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 377ALA 1174
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 7MQJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
381 391Right-handed alpha
Helix 2
AA2
A
391 396Right-handed alpha
Helix 3
AA3
A
396 407Right-handed alpha
Helix 4
AA4
A
419 431Right-handed alpha
Helix 5
AA5
A
451 466Right-handed alpha
Helix 6
AA6
A
467 471Right-handed 310
Helix 7
AA7
A
494 504Right-handed alpha
Helix 8
AA8
A
517 521Right-handed 310
Helix 9
AA9
A
522 546Right-handed alpha
Helix 10
AB1
A
564 569Right-handed alpha
Helix 11
AB2
A
601 617Right-handed alpha
Helix 12
AB3
A
628 643Right-handed alpha
Helix 13
AB4
A
650 655Right-handed alpha
Helix 14
AB5
A
672 676Right-handed 310
Helix 15
AB6
A
684 692Right-handed alpha
Helix 16
AB7
A
693 697Right-handed 310
Helix 17
AB8
A
739 744Right-handed alpha
Helix 18
AB9
A
745 748Right-handed 310
Helix 19
AC1
A
762 767Right-handed alpha
Helix 20
AC2
A
802 812Right-handed alpha
Helix 21
AC3
A
813 815Right-handed 310
Helix 22
AC4
A
826 834Right-handed alpha
Helix 23
AC5
A
840 845Right-handed 310
Helix 24
AC6
A
846 857Right-handed alpha
Helix 25
AC7
A
872 886Right-handed alpha
Helix 26
AC8
A
896 904Right-handed alpha
Helix 27
AC9
A
908 917Right-handed alpha
Helix 28
AD1
A
923 937Right-handed alpha
Helix 29
AD2
A
942 947Right-handed alpha
Helix 30
AD3
A
976 994Right-handed alpha
Helix 31
AD4
A
1001 1014Right-handed alpha
Helix 32
AD5
A
1015 1016Right-handed 310
Helix 33
AD6
A
1017 1019Right-handed 310
Helix 34
AD7
A
1020 1029Right-handed alpha
Helix 35
AD8
A
1031 1054Right-handed alpha
Helix 36
AD9
A
1063 1068Right-handed 310
Helix 37
AE1
A
1073 1088Right-handed alpha
Helix 38
AE2
A
1096 1100Right-handed alpha
Helix 39
AE3
A
1111 1115Right-handed 310
Helix 40
AE4
A
1127 1132Right-handed 310
Helix 41
AE5
A
1139 1144Right-handed 310
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There are 4 sheets in PDB entry 7MQJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 476first strand
Strand 2
A
489 493parallel
Strand 3
A
444 449parallel
Strand 4
A
510 515parallel
Strand 5
A
554 559parallel
Strand 6
A
409 413parallel
Strand 7
A
580 582parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
590 594first strand
Strand 2
A
819 823parallel
Strand 3
A
773 778parallel
Strand 4
A
621 625parallel
Strand 5
A
755 760parallel
Strand 6
A
729 734parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
781 788first strand
Strand 2
A
793 800anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1117 1119first strand
Strand 2
A
1092 1095anti-parallel
Strand 3
A
1151 1158anti-parallel
Strand 4
A
1166 1172anti-parallel
Strand 5
A
1134 1135parallel
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