Analysis of interatomic Contacts of Structural Units in PDB entry:
7MQN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MQN entry

There are 2 chains in PDB entry 7MQN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 29ALA 379
B
 SER 29ALA 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 7MQN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 43Right-handed alpha
Helix 2
AA2
A
85 100Right-handed alpha
Helix 3
AA3
A
108 112Right-handed 310
Helix 4
AA4
A
113 117Right-handed 310
Helix 5
AA5
A
119 124Right-handed alpha
Helix 6
AA6
A
125 131Right-handed alpha
Helix 7
AA7
A
147 157Right-handed alpha
Helix 8
AA8
A
169 185Right-handed alpha
Helix 9
AA9
A
187 195Right-handed alpha
Helix 10
AB1
A
195 200Right-handed alpha
Helix 11
AB2
A
210 217Right-handed 310
Helix 12
AB3
A
236 242Right-handed alpha
Helix 13
AB4
A
247 258Right-handed alpha
Helix 14
AB5
A
264 276Right-handed alpha
Helix 15
AB6
A
298 306Right-handed alpha
Helix 16
AB7
A
307 312Right-handed alpha
Helix 17
AB8
A
347 349Right-handed 310
Helix 18
AB9
A
362 379Right-handed alpha
Helix 19
AC1
B
30 44Right-handed alpha
Helix 20
AC2
B
85 100Right-handed alpha
Helix 21
AC3
B
108 112Right-handed 310
Helix 22
AC4
B
113 117Right-handed 310
Helix 23
AC5
B
119 124Right-handed alpha
Helix 24
AC6
B
125 131Right-handed alpha
Helix 25
AC7
B
147 158Right-handed alpha
Helix 26
AC8
B
169 184Right-handed alpha
Helix 27
AC9
B
187 195Right-handed alpha
Helix 28
AD1
B
195 200Right-handed alpha
Helix 29
AD2
B
210 217Right-handed 310
Helix 30
AD3
B
236 242Right-handed alpha
Helix 31
AD4
B
247 258Right-handed alpha
Helix 32
AD5
B
264 276Right-handed alpha
Helix 33
AD6
B
298 306Right-handed alpha
Helix 34
AD7
B
307 312Right-handed alpha
Helix 35
AD8
B
347 349Right-handed 310
Helix 36
AD9
B
362 378Right-handed alpha
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There are 6 sheets in PDB entry 7MQN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 73first strand
Strand 2
A
57 67anti-parallel
Strand 3
A
47 54anti-parallel
Strand 4
A
351 357anti-parallel
Strand 5
A
340 346anti-parallel
Strand 6
A
328 335anti-parallel
Strand 7
A
291 294anti-parallel
Strand 8
A
285 286anti-parallel
Strand 9
A
279 280anti-parallel
Strand 10
A
318 319anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 81first strand
Strand 2
A
244 246anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 221first strand
Strand 2
A
228 229anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 73first strand
Strand 2
B
57 67anti-parallel
Strand 3
B
47 54anti-parallel
Strand 4
B
351 357anti-parallel
Strand 5
B
339 346anti-parallel
Strand 6
B
328 336anti-parallel
Strand 7
B
291 294anti-parallel
Strand 8
B
285 286anti-parallel
Strand 9
B
279 280anti-parallel
Strand 10
B
318 319anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 81first strand
Strand 2
B
244 246anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 221first strand
Strand 2
B
228 229anti-parallel
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