Analysis of interatomic Contacts of Structural Units in PDB entry:
7MQO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MQO entry

There are 6 chains in PDB entry 7MQO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1GLN 24
B
 ASN 3LEU 20
F
 HIS 1PRO 718
E
 HIS 1PRO 718
C
 GLY 1GLN 24
D
 ASN 3LEU 20
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7MQO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 7Right-handed alpha
Helix 2
AA2
A
12 20Right-handed alpha
Helix 3
AA3
A
21 23Right-handed 310
Helix 4
AA4
B
7 12Right-handed alpha
Helix 5
AA5
B
14 19Right-handed alpha
Helix 6
AA6
F
148 152Right-handed 310
Helix 7
AA7
F
255 269Right-handed alpha
Helix 8
AA8
F
323 328Right-handed alpha
Helix 9
AA9
F
351 358Right-handed alpha
Helix 10
AB1
F
435 447Right-handed alpha
Helix 11
AB2
F
496 498Right-handed 310
Helix 12
AB3
F
693 714Right-handed alpha
Helix 13
AB4
E
148 152Right-handed 310
Helix 14
AB5
E
255 269Right-handed alpha
Helix 15
AB6
E
323 328Right-handed alpha
Helix 16
AB7
E
351 358Right-handed alpha
Helix 17
AB8
E
435 447Right-handed alpha
Helix 18
AB9
E
496 498Right-handed 310
Helix 19
AC1
E
693 714Right-handed alpha
Helix 20
AC2
C
2 7Right-handed alpha
Helix 21
AC3
C
12 20Right-handed alpha
Helix 22
AC4
C
21 23Right-handed 310
Helix 23
AC5
D
7 12Right-handed alpha
Helix 24
AC6
D
14 19Right-handed alpha
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There are 18 sheets in PDB entry 7MQO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
7 8first strand
Strand 2
F
28 29parallel
Strand 3
F
56 57parallel
Strand 4
F
81 82parallel
Strand 5
F
111 112parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
11 13first strand
Strand 2
F
32 35parallel
Strand 3
F
60 63parallel
Strand 4
F
93 95parallel
Strand 5
F
117 119parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
232 233first strand
Strand 2
F
236 237anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
246 248first strand
Strand 2
F
252 254anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
292 294first strand
Strand 2
F
301 303anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
311 313first strand
Strand 2
F
335 337parallel
Strand 3
F
363 364parallel
Strand 4
F
387 388parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
368 370first strand
Strand 2
F
400 402parallel
Strand 3
F
426 428parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
475 480first strand
Strand 2
F
485 489anti-parallel
Strand 3
F
552 553anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
530 534first strand
Strand 2
F
500 509anti-parallel
Strand 3
F
562 570anti-parallel
Strand 4
F
586 588anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
7 8first strand
Strand 2
E
28 29parallel
Strand 3
E
56 57parallel
Strand 4
E
81 82parallel
Strand 5
E
111 112parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
11 13first strand
Strand 2
E
32 35parallel
Strand 3
E
60 63parallel
Strand 4
E
93 95parallel
Strand 5
E
117 119parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
232 233first strand
Strand 2
E
236 237anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
246 248first strand
Strand 2
E
252 254anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
292 294first strand
Strand 2
E
301 303anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
311 313first strand
Strand 2
E
335 337parallel
Strand 3
E
363 364parallel
Strand 4
E
387 388parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
368 370first strand
Strand 2
E
400 402parallel
Strand 3
E
426 428parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
475 480first strand
Strand 2
E
485 489anti-parallel
Strand 3
E
552 553anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
530 534first strand
Strand 2
E
500 509anti-parallel
Strand 3
E
562 570anti-parallel
Strand 4
E
586 588anti-parallel
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