Analysis of interatomic Contacts of Structural Units in PDB entry:
7MQW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MQW entry

There are 2 chains in PDB entry 7MQW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 3	SER 139
B	MET 3	SER 139

There are 11 helices in PDB entry 7MQW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	14	Right-handed alpha
Helix 2	AA2	A	52	56	Right-handed 310
Helix 3	AA3	A	57	80	Right-handed alpha
Helix 4	AA4	A	105	109	Right-handed 310
Helix 5	AA5	A	110	114	Right-handed 310
Helix 6	AA6	A	119	139	Right-handed alpha
Helix 7	AA7	B	4	14	Right-handed alpha
Helix 8	AA8	B	52	56	Right-handed 310
Helix 9	AA9	B	57	80	Right-handed alpha
Helix 10	AB1	B	105	109	Right-handed 310
Helix 11	AB2	B	119	138	Right-handed alpha

There is 1 sheet (AA1) in PDB entry 7MQW.

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	24	first strand
Strand 2	A	28	32	anti-parallel
Strand 3	A	42	46	anti-parallel
Strand 4	A	98	103	anti-parallel
Strand 5	A	83	88	anti-parallel
Strand 6	B	83	88	anti-parallel
Strand 7	B	98	103	anti-parallel
Strand 8	B	42	46	anti-parallel
Strand 9	B	28	32	anti-parallel
Strand 10	B	21	24	anti-parallel

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MQW

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MQW