Analysis of interatomic Contacts of Structural Units in PDB entry:
7MQY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MQY entry

There is 1 chain in PDB entry 7MQY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 597PRO 1199
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 7MQY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
728 732Right-handed 310
Helix 2
AA2
A
1072 1084Right-handed alpha
Helix 3
AA3
A
1154 1167Right-handed alpha
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There are 10 sheets in PDB entry 7MQY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
605 612first strand
Strand 2
A
617 622anti-parallel
Strand 3
A
662 665anti-parallel
Strand 4
A
651 652anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
647 648first strand
Strand 2
A
631 639anti-parallel
Strand 3
A
656 657anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
647 648first strand
Strand 2
A
631 639anti-parallel
Strand 3
A
673 682anti-parallel
Strand 4
A
696 697anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
708 712first strand
Strand 2
A
719 725anti-parallel
Strand 3
A
763 767anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
788 792first strand
Strand 2
A
776 785anti-parallel
Strand 3
A
796 799anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
788 792first strand
Strand 2
A
776 785anti-parallel
Strand 3
A
738 744anti-parallel
Strand 4
A
751 756anti-parallel
Strand 5
A
1134 1136anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1059 1061first strand
Strand 2
A
1050 1052anti-parallel
Strand 3
A
1040 1042anti-parallel
Strand 4
A
1122 1126anti-parallel
Strand 5
A
1089 1094anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1099 1104first strand
Strand 2
A
1115 1119anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1141 1146first strand
Strand 2
A
1185 1194anti-parallel
Strand 3
A
1152 1153anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1141 1146first strand
Strand 2
A
1185 1194anti-parallel
Strand 3
A
1171 1182anti-parallel
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