Analysis of interatomic Contacts of Structural Units in PDB entry:
7MR4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MR4 entry

There are 5 chains in PDB entry 7MR4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ALA 5	THR 869
C	MET 1	GLN 1121
D	LYS 2	ASN 124
X	C 9	T 25
A	G 56	G 71

There are 93 helices in PDB entry 7MR4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	28	43	Right-handed alpha
Helix 2	AA2	B	45	49	Right-handed 310
Helix 3	AA3	B	55	59	Right-handed 310
Helix 4	AA4	B	65	90	Right-handed alpha
Helix 5	AA5	B	94	104	Right-handed alpha
Helix 6	AA6	B	106	120	Right-handed alpha
Helix 7	AA7	B	121	124	Right-handed 310
Helix 8	AA8	B	128	140	Right-handed alpha
Helix 9	AA9	B	140	145	Right-handed alpha
Helix 10	AB1	B	155	173	Right-handed alpha
Helix 11	AB2	B	176	187	Right-handed alpha
Helix 12	AB3	B	189	202	Right-handed alpha
Helix 13	AB4	B	217	240	Right-handed alpha
Helix 14	AB5	B	255	266	Right-handed alpha
Helix 15	AB6	B	276	281	Right-handed 310
Helix 16	AB7	B	282	289	Right-handed alpha
Helix 17	AB8	B	308	318	Right-handed alpha
Helix 18	AB9	B	323	347	Right-handed alpha
Helix 19	AC1	B	350	364	Right-handed alpha
Helix 20	AC2	B	366	378	Right-handed alpha
Helix 21	AC3	B	390	402	Right-handed alpha
Helix 22	AC4	B	414	418	Right-handed 310
Helix 23	AC5	B	426	437	Right-handed alpha
Helix 24	AC6	B	450	463	Right-handed alpha
Helix 25	AC7	B	481	485	Right-handed 310
Helix 26	AC8	B	510	535	Right-handed alpha
Helix 27	AC9	B	560	574	Right-handed alpha
Helix 28	AD1	B	586	590	Right-handed 310
Helix 29	AD2	B	591	605	Right-handed alpha
Helix 30	AD3	B	608	617	Right-handed alpha
Helix 31	AD4	B	624	632	Right-handed alpha
Helix 32	AD5	B	634	656	Right-handed alpha
Helix 33	AD6	B	657	669	Right-handed alpha
Helix 34	AD7	B	669	677	Right-handed alpha
Helix 35	AD8	B	679	701	Right-handed alpha
Helix 36	AD9	B	703	717	Right-handed alpha
Helix 37	AE1	B	783	808	Right-handed alpha
Helix 38	AE2	B	832	835	Right-handed 310
Helix 39	AE3	B	836	843	Right-handed alpha
Helix 40	AE4	B	849	861	Right-handed alpha
Helix 41	AE5	C	9	24	Right-handed alpha
Helix 42	AE6	C	40	55	Right-handed alpha
Helix 43	AE7	C	64	77	Right-handed alpha
Helix 44	AE8	C	89	103	Right-handed alpha
Helix 45	AE9	C	108	116	Right-handed alpha
Helix 46	AF1	C	121	142	Right-handed alpha
Helix 47	AF2	C	142	152	Right-handed alpha
Helix 48	AF3	C	161	179	Right-handed alpha
Helix 49	AF4	C	185	199	Right-handed alpha
Helix 50	AF5	C	220	231	Right-handed alpha
Helix 51	AF6	C	253	260	Right-handed alpha
Helix 52	AF7	C	276	283	Right-handed alpha
Helix 53	AF8	C	297	304	Right-handed alpha
Helix 54	AF9	C	304	316	Right-handed alpha
Helix 55	AG1	C	333	345	Right-handed alpha
Helix 56	AG2	C	354	360	Right-handed alpha
Helix 57	AG3	C	381	400	Right-handed alpha
Helix 58	AG4	C	404	406	Right-handed 310
Helix 59	AG5	C	418	429	Right-handed alpha
Helix 60	AG6	C	447	459	Right-handed alpha
Helix 61	AG7	C	460	463	Right-handed 310
Helix 62	AG8	C	466	475	Right-handed alpha
Helix 63	AG9	C	476	483	Right-handed alpha
Helix 64	AH1	C	486	500	Right-handed alpha
Helix 65	AH2	C	507	513	Right-handed alpha
Helix 66	AH3	C	523	537	Right-handed alpha
Helix 67	AH4	C	555	557	Right-handed 310
Helix 68	AH5	C	558	578	Right-handed alpha
Helix 69	AH6	C	583	599	Right-handed alpha
Helix 70	AH7	C	605	627	Right-handed alpha
Helix 71	AH8	C	633	647	Right-handed alpha
Helix 72	AH9	C	707	723	Right-handed alpha
Helix 73	AI1	C	745	758	Right-handed alpha
Helix 74	AI2	C	768	780	Right-handed alpha
Helix 75	AI3	C	834	843	Right-handed alpha
Helix 76	AI4	C	843	852	Right-handed alpha
Helix 77	AI5	C	874	890	Right-handed alpha
Helix 78	AI6	C	894	905	Right-handed alpha
Helix 79	AI7	C	910	934	Right-handed alpha
Helix 80	AI8	C	973	990	Right-handed alpha
Helix 81	AI9	C	1012	1033	Right-handed alpha
Helix 82	AJ1	C	1039	1049	Right-handed alpha
Helix 83	AJ2	C	1060	1076	Right-handed alpha
Helix 84	AJ3	C	1087	1094	Right-handed alpha
Helix 85	AJ4	C	1098	1113	Right-handed alpha
Helix 86	AJ5	C	1113	1119	Right-handed alpha
Helix 87	AJ6	D	3	13	Right-handed alpha
Helix 88	AJ7	D	17	29	Right-handed alpha
Helix 89	AJ8	D	32	49	Right-handed alpha
Helix 90	AJ9	D	54	61	Right-handed alpha
Helix 91	AK1	D	66	72	Right-handed alpha
Helix 92	AK2	D	80	88	Right-handed alpha
Helix 93	AK3	D	109	124	Right-handed alpha

There are 16 sheets in PDB entry 7MR4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	6	7	first strand
Strand 2	B	441	442	parallel
Strand 3	B	18	22	parallel
Strand 4	B	409	413	parallel
Strand 5	B	382	383	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	62	first strand
Strand 2	B	126	127	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	207	208	first strand
Strand 2	B	776	778	parallel
Strand 3	B	767	769	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	487	490	first strand
Strand 2	B	539	542	anti-parallel
Strand 3	B	545	548	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	499	502	first strand
Strand 2	B	865	868	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	555	558	first strand
Strand 2	B	736	740	parallel
Strand 3	B	578	580	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	751	754	first strand
Strand 2	B	812	815	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	61	first strand
Strand 2	C	33	36	parallel
Strand 3	C	210	214	parallel
Strand 4	C	235	240	parallel
Strand 5	C	2	6	parallel
Strand 6	C	321	324	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	264	265	first strand
Strand 2	C	271	272	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	365	366	first strand
Strand 2	C	759	760	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	437	439	first strand
Strand 2	C	659	663	parallel
Strand 3	C	408	412	parallel
Strand 4	C	674	677	parallel
Strand 5	C	726	732	parallel
Strand 6	C	374	379	parallel
Strand 7	C	781	782	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	734	735	first strand
Strand 2	C	740	741	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	831	833	first strand
Strand 2	C	950	959	parallel
Strand 3	C	939	947	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	965	967	first strand
Strand 2	C	996	999	parallel
Strand 3	C	1005	1008	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1050	1051	first strand
Strand 2	C	1056	1057	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	91	92	first strand
Strand 2	D	100	101	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MR4

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MR4