Analysis of interatomic Contacts of Structural Units in PDB entry:
7MRM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MRM entry

There are 2 chains in PDB entry 7MRM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	GLY 496	ALA 1190
A	GLY 496	ALA 1190

There are 7 helices in PDB entry 7MRM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	625	629	Right-handed 310
Helix 2	AA2	B	1065	1077	Right-handed alpha
Helix 3	AA3	B	1146	1161	Right-handed alpha
Helix 4	AA4	A	625	629	Right-handed 310
Helix 5	AA5	A	1065	1077	Right-handed alpha
Helix 6	AA6	A	1099	1103	Right-handed 310
Helix 7	AA7	A	1146	1161	Right-handed alpha

There are 16 sheets in PDB entry 7MRM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	502	507	first strand
Strand 2	B	514	519	anti-parallel
Strand 3	B	559	562	anti-parallel
Strand 4	B	548	549	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	544	545	first strand
Strand 2	B	530	536	anti-parallel
Strand 3	B	570	578	anti-parallel
Strand 4	B	593	594	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	608	609	first strand
Strand 2	B	616	620	anti-parallel
Strand 3	B	660	664	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	685	689	first strand
Strand 2	B	673	682	anti-parallel
Strand 3	B	693	696	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	685	689	first strand
Strand 2	B	673	682	anti-parallel
Strand 3	B	635	642	anti-parallel
Strand 4	B	648	653	anti-parallel
Strand 5	B	1127	1129	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1051	1054	first strand
Strand 2	B	1043	1046	anti-parallel
Strand 3	B	1033	1035	anti-parallel
Strand 4	B	1115	1119	anti-parallel
Strand 5	B	1082	1087	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1092	1094	first strand
Strand 2	B	1110	1112	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1134	1139	first strand
Strand 2	B	1178	1187	anti-parallel
Strand 3	B	1164	1175	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	502	507	first strand
Strand 2	A	514	519	anti-parallel
Strand 3	A	559	563	anti-parallel
Strand 4	A	547	549	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	544	545	first strand
Strand 2	A	530	536	anti-parallel
Strand 3	A	570	578	anti-parallel
Strand 4	A	593	594	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	608	609	first strand
Strand 2	A	616	620	anti-parallel
Strand 3	A	660	664	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	685	689	first strand
Strand 2	A	673	682	anti-parallel
Strand 3	A	693	696	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	685	689	first strand
Strand 2	A	673	682	anti-parallel
Strand 3	A	635	642	anti-parallel
Strand 4	A	648	653	anti-parallel
Strand 5	A	1127	1129	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1052	1053	first strand
Strand 2	A	1043	1045	anti-parallel
Strand 3	A	1033	1035	anti-parallel
Strand 4	A	1115	1119	anti-parallel
Strand 5	A	1082	1087	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1092	1094	first strand
Strand 2	A	1110	1112	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1134	1139	first strand
Strand 2	A	1178	1187	anti-parallel
Strand 3	A	1164	1175	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MRM

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MRM