Analysis of interatomic Contacts of Structural Units in PDB entry:
7MRY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MRY entry

There are 3 chains in PDB entry 7MRY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 45	ASN 532
B	GLN 1045	MET 1530
C	GLN 2045	MET 2530

There are 20 helices in PDB entry 7MRY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	55	Right-handed 310
Helix 2	AA2	A	82	85	Right-handed 310
Helix 3	AA3	A	86	94	Right-handed alpha
Helix 4	AA4	A	136	141	Right-handed 310
Helix 5	AA5	A	219	223	Right-handed 310
Helix 6	AA6	A	233	237	Right-handed 310
Helix 7	AA7	A	454	465	Right-handed alpha
Helix 8	AA8	B	1049	1055	Right-handed alpha
Helix 9	AA9	B	1082	1085	Right-handed 310
Helix 10	AB1	B	1086	1093	Right-handed alpha
Helix 11	AB2	B	1094	1096	Right-handed 310
Helix 12	AB3	B	1134	1141	Right-handed alpha
Helix 13	AB4	B	1454	1464	Right-handed alpha
Helix 14	AB5	C	2049	2054	Right-handed alpha
Helix 15	AB6	C	2082	2085	Right-handed 310
Helix 16	AB7	C	2086	2093	Right-handed alpha
Helix 17	AB8	C	2094	2096	Right-handed 310
Helix 18	AB9	C	2136	2141	Right-handed 310
Helix 19	AC1	C	2233	2237	Right-handed 310
Helix 20	AC2	C	2454	2464	Right-handed alpha

There are 19 sheets in PDB entry 7MRY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	66	first strand
Strand 2	A	198	206	anti-parallel
Strand 3	A	103	110	anti-parallel
Strand 4	A	154	158	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	80	first strand
Strand 2	A	177	182	anti-parallel
Strand 3	A	118	124	anti-parallel
Strand 4	A	143	147	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	448	451	first strand
Strand 2	A	430	437	anti-parallel
Strand 3	A	248	251	anti-parallel
Strand 4	A	505	506	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	448	451	first strand
Strand 2	A	430	437	anti-parallel
Strand 3	A	496	499	anti-parallel
Strand 4	A	485	492	anti-parallel
Strand 5	A	472	478	anti-parallel
Strand 6	A	514	521	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	286	292	first strand
Strand 2	A	298	303	anti-parallel
Strand 3	A	365	369	anti-parallel
Strand 4	A	347	352	anti-parallel
Strand 5	A	329	336	anti-parallel
Strand 6	A	381	389	anti-parallel
Strand 7	A	286	292	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1057	1066	first strand
Strand 2	B	1198	1206	anti-parallel
Strand 3	B	1103	1108	anti-parallel
Strand 4	B	1154	1158	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1075	1080	first strand
Strand 2	B	1177	1188	anti-parallel
Strand 3	B	1115	1124	anti-parallel
Strand 4	B	1143	1147	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1167	1168	first strand
Strand 2	B	1098	1100	anti-parallel
Strand 3	B	1211	1212	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1448	1451	first strand
Strand 2	B	1429	1437	anti-parallel
Strand 3	B	1248	1251	anti-parallel
Strand 4	B	1505	1506	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1448	1451	first strand
Strand 2	B	1429	1437	anti-parallel
Strand 3	B	1496	1500	anti-parallel
Strand 4	B	1485	1492	anti-parallel
Strand 5	B	1472	1478	anti-parallel
Strand 6	B	1514	1521	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1266	1267	first strand
Strand 2	B	1271	1272	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1286	1292	first strand
Strand 2	B	1299	1303	anti-parallel
Strand 3	B	1364	1369	anti-parallel
Strand 4	B	1344	1352	anti-parallel
Strand 5	B	1329	1337	anti-parallel
Strand 6	B	1380	1389	anti-parallel
Strand 7	B	1286	1292	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2057	2066	first strand
Strand 2	C	2198	2206	anti-parallel
Strand 3	C	2103	2110	anti-parallel
Strand 4	C	2154	2158	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2075	2080	first strand
Strand 2	C	2177	2187	anti-parallel
Strand 3	C	2116	2124	anti-parallel
Strand 4	C	2143	2147	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2167	2168	first strand
Strand 2	C	2098	2100	anti-parallel
Strand 3	C	2211	2212	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2448	2451	first strand
Strand 2	C	2429	2437	anti-parallel
Strand 3	C	2248	2251	anti-parallel
Strand 4	C	2505	2506	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2448	2451	first strand
Strand 2	C	2429	2437	anti-parallel
Strand 3	C	2496	2500	anti-parallel
Strand 4	C	2485	2492	anti-parallel
Strand 5	C	2472	2478	anti-parallel
Strand 6	C	2514	2521	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2266	2267	first strand
Strand 2	C	2271	2272	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2286	2293	first strand
Strand 2	C	2298	2303	anti-parallel
Strand 3	C	2365	2368	anti-parallel
Strand 4	C	2347	2352	anti-parallel
Strand 5	C	2329	2336	anti-parallel
Strand 6	C	2381	2389	anti-parallel
Strand 7	C	2286	2293	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MRY

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MRY