Analysis of interatomic Contacts of Structural Units in PDB entry:
7MSW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MSW entry

There is 1 chain in PDB entry 7MSW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 4GLY 638
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7MSW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 28Right-handed alpha
Helix 2
AA2
A
34 45Right-handed alpha
Helix 3
AA3
A
46 50Right-handed 310
Helix 4
AA4
A
68 72Right-handed 310
Helix 5
AA5
A
73 75Right-handed 310
Helix 6
AA6
A
114 124Right-handed alpha
Helix 7
AA7
A
128 132Right-handed 310
Helix 8
AA8
A
190 195Right-handed alpha
Helix 9
AA9
A
203 212Right-handed alpha
Helix 10
AB1
A
262 275Right-handed alpha
Helix 11
AB2
A
290 299Right-handed alpha
Helix 12
AB3
A
303 311Right-handed alpha
Helix 13
AB4
A
315 325Right-handed alpha
Helix 14
AB5
A
358 368Right-handed alpha
Helix 15
AB6
A
378 394Right-handed alpha
Helix 16
AB7
A
396 408Right-handed alpha
Helix 17
AB8
A
414 423Right-handed alpha
Helix 18
AB9
A
424 438Right-handed alpha
Helix 19
AC1
A
444 455Right-handed alpha
Helix 20
AC2
A
456 460Right-handed 310
Helix 21
AC3
A
461 474Right-handed alpha
Helix 22
AC4
A
492 508Right-handed alpha
Helix 23
AC5
A
545 547Right-handed 310
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There are 8 sheets in PDB entry 7MSW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 7first strand
Strand 2
A
58 64parallel
Strand 3
A
77 82anti-parallel
Strand 4
A
99 103anti-parallel
Strand 5
A
240 250anti-parallel
Strand 6
A
184 189anti-parallel
Strand 7
A
133 134parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 7first strand
Strand 2
A
58 64parallel
Strand 3
A
77 82anti-parallel
Strand 4
A
99 103anti-parallel
Strand 5
A
240 250anti-parallel
Strand 6
A
229 237anti-parallel
Strand 7
A
221 226anti-parallel
Strand 8
A
216 218anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 169first strand
Strand 2
A
158 160anti-parallel
Strand 3
A
149 154anti-parallel
Strand 4
A
137 142anti-parallel
Strand 5
A
175 177anti-parallel
Strand 6
A
258 259anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 334first strand
Strand 2
A
279 284parallel
Strand 3
A
341 343parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
478 480first strand
Strand 2
A
483 485anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
510 515first strand
Strand 2
A
518 524anti-parallel
Strand 3
A
529 530anti-parallel
Strand 4
A
536 543anti-parallel
Strand 5
A
558 564anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
566 567first strand
Strand 2
A
628 635anti-parallel
Strand 3
A
619 622anti-parallel
Strand 4
A
608 613anti-parallel
Strand 5
A
600 605anti-parallel
Strand 6
A
577 579parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
566 567first strand
Strand 2
A
628 635anti-parallel
Strand 3
A
583 585anti-parallel
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