Analysis of interatomic Contacts of Structural Units in PDB entry:
7MVS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MVS entry

There are 4 chains in PDB entry 7MVS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 9	LEU 691
B	LYS 10	LEU 691
C	A 1	T 20
D	A 1	T 20

There are 58 helices in PDB entry 7MVS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	29	40	Right-handed alpha
Helix 2	AA2	A	61	66	Right-handed alpha
Helix 3	AA3	A	68	79	Right-handed alpha
Helix 4	AA4	A	82	86	Right-handed 310
Helix 5	AA5	A	87	91	Right-handed 310
Helix 6	AA6	A	103	121	Right-handed alpha
Helix 7	AA7	A	121	127	Right-handed alpha
Helix 8	AA8	A	141	145	Right-handed 310
Helix 9	AA9	A	146	154	Right-handed alpha
Helix 10	AB1	A	169	182	Right-handed alpha
Helix 11	AB2	A	184	196	Right-handed alpha
Helix 12	AB3	A	215	233	Right-handed alpha
Helix 13	AB4	A	244	257	Right-handed alpha
Helix 14	AB5	A	268	279	Right-handed alpha
Helix 15	AB6	A	283	296	Right-handed alpha
Helix 16	AB7	A	330	338	Right-handed alpha
Helix 17	AB8	A	366	372	Right-handed alpha
Helix 18	AB9	A	388	401	Right-handed alpha
Helix 19	AC1	A	406	414	Right-handed alpha
Helix 20	AC2	A	428	438	Right-handed alpha
Helix 21	AC3	A	470	484	Right-handed alpha
Helix 22	AC4	A	514	526	Right-handed alpha
Helix 23	AC5	A	548	591	Right-handed alpha
Helix 24	AC6	A	591	601	Right-handed alpha
Helix 25	AC7	A	604	617	Right-handed alpha
Helix 26	AC8	A	619	628	Right-handed alpha
Helix 27	AC9	A	630	634	Right-handed 310
Helix 28	AD1	A	635	662	Right-handed alpha
Helix 29	AD2	A	662	682	Right-handed alpha
Helix 30	AD3	B	29	40	Right-handed alpha
Helix 31	AD4	B	61	66	Right-handed alpha
Helix 32	AD5	B	68	79	Right-handed alpha
Helix 33	AD6	B	82	86	Right-handed 310
Helix 34	AD7	B	87	91	Right-handed 310
Helix 35	AD8	B	103	121	Right-handed alpha
Helix 36	AD9	B	121	127	Right-handed alpha
Helix 37	AE1	B	141	145	Right-handed 310
Helix 38	AE2	B	146	154	Right-handed alpha
Helix 39	AE3	B	169	182	Right-handed alpha
Helix 40	AE4	B	184	196	Right-handed alpha
Helix 41	AE5	B	215	233	Right-handed alpha
Helix 42	AE6	B	244	257	Right-handed alpha
Helix 43	AE7	B	268	279	Right-handed alpha
Helix 44	AE8	B	283	296	Right-handed alpha
Helix 45	AE9	B	330	338	Right-handed alpha
Helix 46	AF1	B	366	372	Right-handed alpha
Helix 47	AF2	B	388	401	Right-handed alpha
Helix 48	AF3	B	406	414	Right-handed alpha
Helix 49	AF4	B	428	438	Right-handed alpha
Helix 50	AF5	B	470	484	Right-handed alpha
Helix 51	AF6	B	514	526	Right-handed alpha
Helix 52	AF7	B	548	591	Right-handed alpha
Helix 53	AF8	B	591	601	Right-handed alpha
Helix 54	AF9	B	604	617	Right-handed alpha
Helix 55	AG1	B	619	628	Right-handed alpha
Helix 56	AG2	B	630	634	Right-handed 310
Helix 57	AG3	B	635	662	Right-handed alpha
Helix 58	AG4	B	662	682	Right-handed alpha

There are 14 sheets in PDB entry 7MVS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	49	first strand
Strand 2	A	23	27	parallel
Strand 3	A	96	98	parallel
Strand 4	A	130	132	parallel
Strand 5	A	162	166	anti-parallel
Strand 6	A	210	214	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	267	first strand
Strand 2	A	326	329	anti-parallel
Strand 3	A	305	308	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	349	first strand
Strand 2	A	356	358	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	373	376	first strand
Strand 2	A	381	384	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	529	535	first strand
Strand 2	A	439	445	anti-parallel
Strand 3	A	424	426	anti-parallel
Strand 4	A	688	690	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	447	452	first strand
Strand 2	A	458	464	anti-parallel
Strand 3	A	505	509	anti-parallel
Strand 4	A	490	495	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	537	540	first strand
Strand 2	A	543	546	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	49	first strand
Strand 2	B	23	27	parallel
Strand 3	B	96	98	parallel
Strand 4	B	130	132	parallel
Strand 5	B	162	166	anti-parallel
Strand 6	B	210	214	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	267	first strand
Strand 2	B	326	329	anti-parallel
Strand 3	B	305	308	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	347	349	first strand
Strand 2	B	356	358	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	373	376	first strand
Strand 2	B	381	384	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	529	535	first strand
Strand 2	B	439	445	anti-parallel
Strand 3	B	424	426	anti-parallel
Strand 4	B	688	690	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	447	452	first strand
Strand 2	B	458	464	anti-parallel
Strand 3	B	505	509	anti-parallel
Strand 4	B	490	495	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	537	540	first strand
Strand 2	B	543	546	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MVS

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MVS