Analysis of interatomic Contacts of Structural Units in PDB entry:
7MWA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MWA entry

There are 2 chains in PDB entry 7MWA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 3	VAL 385
B	GLN 3	VAL 385

There are 24 helices in PDB entry 7MWA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	24	Right-handed alpha
Helix 2	AA2	A	59	69	Right-handed alpha
Helix 3	AA3	A	71	76	Right-handed alpha
Helix 4	AA4	A	114	127	Right-handed alpha
Helix 5	AA5	A	175	181	Right-handed alpha
Helix 6	AA6	A	240	244	Right-handed 310
Helix 7	AA7	A	246	248	Right-handed 310
Helix 8	AA8	A	249	262	Right-handed alpha
Helix 9	AA9	A	296	298	Right-handed 310
Helix 10	AB1	A	309	329	Right-handed alpha
Helix 11	AB2	A	336	366	Right-handed alpha
Helix 12	AB3	A	369	377	Right-handed alpha
Helix 13	AB4	B	11	24	Right-handed alpha
Helix 14	AB5	B	59	69	Right-handed alpha
Helix 15	AB6	B	71	76	Right-handed alpha
Helix 16	AB7	B	114	128	Right-handed alpha
Helix 17	AB8	B	175	181	Right-handed alpha
Helix 18	AB9	B	239	244	Right-handed 310
Helix 19	AC1	B	246	248	Right-handed 310
Helix 20	AC2	B	249	262	Right-handed alpha
Helix 21	AC3	B	296	298	Right-handed 310
Helix 22	AC4	B	309	329	Right-handed alpha
Helix 23	AC5	B	336	365	Right-handed alpha
Helix 24	AC6	B	369	378	Right-handed alpha

There are 9 sheets in PDB entry 7MWA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	134	first strand
Strand 2	A	28	31	parallel
Strand 3	A	5	8	parallel
Strand 4	A	166	169	parallel
Strand 5	A	292	294	parallel
Strand 6	A	288	289	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	58	first strand
Strand 2	A	110	113	anti-parallel
Strand 3	A	79	81	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	95	101	first strand
Strand 2	A	84	90	anti-parallel
Strand 3	A	208	212	parallel
Strand 4	A	219	223	anti-parallel
Strand 5	A	229	237	anti-parallel
Strand 6	A	185	201	anti-parallel
Strand 7	A	268	271	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	95	101	first strand
Strand 2	A	84	90	anti-parallel
Strand 3	A	208	212	parallel
Strand 4	A	219	223	anti-parallel
Strand 5	A	229	237	anti-parallel
Strand 6	A	185	201	anti-parallel
Strand 7	A	275	284	anti-parallel
Strand 8	A	300	302	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	138	144	first strand
Strand 2	A	149	154	anti-parallel
Strand 3	A	159	164	anti-parallel
Strand 4	B	158	164	anti-parallel
Strand 5	B	149	155	anti-parallel
Strand 6	B	138	144	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	135	first strand
Strand 2	B	28	32	parallel
Strand 3	B	5	8	parallel
Strand 4	B	166	169	parallel
Strand 5	B	292	294	parallel
Strand 6	B	288	289	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	58	first strand
Strand 2	B	110	113	anti-parallel
Strand 3	B	79	81	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	94	101	first strand
Strand 2	B	84	91	anti-parallel
Strand 3	B	208	214	parallel
Strand 4	B	217	223	anti-parallel
Strand 5	B	229	237	anti-parallel
Strand 6	B	185	201	anti-parallel
Strand 7	B	268	271	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	94	101	first strand
Strand 2	B	84	91	anti-parallel
Strand 3	B	208	214	parallel
Strand 4	B	217	223	anti-parallel
Strand 5	B	229	237	anti-parallel
Strand 6	B	185	201	anti-parallel
Strand 7	B	275	284	anti-parallel
Strand 8	B	300	302	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MWA

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MWA