Analysis of interatomic Contacts of Structural Units in PDB entry:
7MWD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MWD entry

There is 1 chain in PDB entry 7MWD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 17ILE 4364
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are136 helices in PDB entry 7MWD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 27Right-handed alpha
Helix 2
AA2
A
32 39Right-handed alpha
Helix 3
AA3
A
55 69Right-handed alpha
Helix 4
AA4
A
89 104Right-handed alpha
Helix 5
AA5
A
115 123Right-handed alpha
Helix 6
AA6
A
127 145Right-handed alpha
Helix 7
AA7
A
155 168Right-handed alpha
Helix 8
AA8
A
172 176Right-handed 310
Helix 9
AA9
A
178 184Right-handed alpha
Helix 10
AB1
A
185 189Right-handed 310
Helix 11
AB2
A
229 233Right-handed 310
Helix 12
AB3
A
235 247Right-handed alpha
Helix 13
AB4
A
253 267Right-handed alpha
Helix 14
AB5
A
269 290Right-handed alpha
Helix 15
AB6
A
304 315Right-handed alpha
Helix 16
AB7
A
320 336Right-handed alpha
Helix 17
AB8
A
343 351Right-handed alpha
Helix 18
AB9
A
357 372Right-handed alpha
Helix 19
AC1
A
379 395Right-handed alpha
Helix 20
AC2
A
396 406Right-handed alpha
Helix 21
AC3
A
407 419Right-handed alpha
Helix 22
AC4
A
422 441Right-handed alpha
Helix 23
AC5
A
444 450Right-handed alpha
Helix 24
AC6
A
451 471Right-handed alpha
Helix 25
AC7
A
501 520Right-handed alpha
Helix 26
AC8
A
527 531Right-handed 310
Helix 27
AC9
A
535 545Right-handed alpha
Helix 28
AD1
A
551 569Right-handed alpha
Helix 29
AD2
A
572 579Right-handed alpha
Helix 30
AD3
A
580 590Right-handed alpha
Helix 31
AD4
A
597 612Right-handed alpha
Helix 32
AD5
A
615 624Right-handed alpha
Helix 33
AD6
A
625 631Right-handed alpha
Helix 34
AD7
A
632 638Right-handed 310
Helix 35
AD8
A
639 644Right-handed alpha
Helix 36
AD9
A
653 670Right-handed alpha
Helix 37
AE1
A
673 694Right-handed alpha
Helix 38
AE2
A
765 784Right-handed alpha
Helix 39
AE3
A
788 796Right-handed alpha
Helix 40
AE4
A
798 805Right-handed alpha
Helix 41
AE5
A
806 808Right-handed 310
Helix 42
AE6
A
818 836Right-handed alpha
Helix 43
AE7
A
838 853Right-handed alpha
Helix 44
AE8
A
854 859Right-handed 310
Helix 45
AE9
A
868 876Right-handed alpha
Helix 46
AF1
A
882 886Right-handed 310
Helix 47
AF2
A
890 911Right-handed alpha
Helix 48
AF3
A
914 926Right-handed alpha
Helix 49
AF4
A
927 956Right-handed alpha
Helix 50
AF5
A
967 975Right-handed alpha
Helix 51
AF6
A
1042 1076Right-handed alpha
Helix 52
AF7
A
1097 1115Right-handed alpha
Helix 53
AF8
A
1124 1143Right-handed alpha
Helix 54
AF9
A
1150 1160Right-handed alpha
Helix 55
AG1
A
1162 1176Right-handed alpha
Helix 56
AG2
A
1181 1186Right-handed alpha
Helix 57
AG3
A
1194 1211Right-handed alpha
Helix 58
AG4
A
1211 1216Right-handed alpha
Helix 59
AG5
A
1237 1255Right-handed alpha
Helix 60
AG6
A
1266 1288Right-handed alpha
Helix 61
AG7
A
1433 1454Right-handed alpha
Helix 62
AG8
A
1457 1472Right-handed alpha
Helix 63
AG9
A
1473 1498Right-handed alpha
Helix 64
AH1
A
1510 1520Right-handed alpha
Helix 65
AH2
A
1520 1540Right-handed alpha
Helix 66
AH3
A
1540 1551Right-handed alpha
Helix 67
AH4
A
1552 1575Right-handed alpha
Helix 68
AH5
A
1582 1608Right-handed alpha
Helix 69
AH6
A
1631 1644Right-handed alpha
Helix 70
AH7
A
1751 1768Right-handed alpha
Helix 71
AH8
A
1771 1786Right-handed alpha
Helix 72
AH9
A
1788 1798Right-handed alpha
Helix 73
AI1
A
1799 1807Right-handed alpha
Helix 74
AI2
A
1808 1812Right-handed 310
Helix 75
AI3
A
1815 1829Right-handed alpha
Helix 76
AI4
A
1830 1848Right-handed alpha
Helix 77
AI5
A
1862 1865Right-handed 310
Helix 78
AI6
A
1866 1874Right-handed alpha
Helix 79
AI7
A
1874 1881Right-handed alpha
Helix 80
AI8
A
1881 1892Right-handed alpha
Helix 81
AI9
A
1907 1917Right-handed alpha
Helix 82
AJ1
A
1939 1954Right-handed alpha
Helix 83
AJ2
A
2067 2082Right-handed alpha
Helix 84
AJ3
A
2082 2092Right-handed alpha
Helix 85
AJ4
A
2107 2115Right-handed alpha
Helix 86
AJ5
A
2127 2142Right-handed alpha
Helix 87
AJ6
A
2146 2166Right-handed alpha
Helix 88
AJ7
A
2169 2188Right-handed alpha
Helix 89
AJ8
A
2211 2219Right-handed alpha
Helix 90
AJ9
A
2220 2227Right-handed alpha
Helix 91
AK1
A
2228 2232Right-handed 310
Helix 92
AK2
A
2238 2259Right-handed alpha
Helix 93
AK3
A
2646 2659Right-handed alpha
Helix 94
AK4
A
2661 2696Right-handed alpha
Helix 95
AK5
A
3182 3191Right-handed alpha
Helix 96
AK6
A
3192 3194Right-handed 310
Helix 97
AK7
A
3201 3213Right-handed alpha
Helix 98
AK8
A
3215 3234Right-handed alpha
Helix 99
AK9
A
3328 3346Right-handed alpha
Helix 100
AL1
A
3388 3398Right-handed alpha
Helix 101
AL2
A
3430 3437Right-handed alpha
Helix 102
AL3
A
3440 3446Right-handed alpha
Helix 103
AL4
A
3446 3461Right-handed alpha
Helix 104
AL5
A
3576 3588Right-handed alpha
Helix 105
AL6
A
3595 3610Right-handed alpha
Helix 106
AL7
A
3612 3650Right-handed alpha
Helix 107
AL8
A
3723 3725Right-handed 310
Helix 108
AL9
A
3726 3731Right-handed alpha
Helix 109
AM1
A
3734 3751Right-handed alpha
Helix 110
AM2
A
3853 3869Right-handed alpha
Helix 111
AM3
A
3873 3878Right-handed 310
Helix 112
AM4
A
3879 3890Right-handed alpha
Helix 113
AM5
A
3954 3962Right-handed alpha
Helix 114
AM6
A
3962 3973Right-handed alpha
Helix 115
AM7
A
3980 3987Right-handed 310
Helix 116
AM8
A
3988 3992Right-handed 310
Helix 117
AM9
A
3993 4009Right-handed alpha
Helix 118
AN1
A
4025 4035Right-handed alpha
Helix 119
AN2
A
4038 4043Right-handed alpha
Helix 120
AN3
A
4057 4073Right-handed alpha
Helix 121
AN4
A
4096 4100Right-handed 310
Helix 122
AN5
A
4102 4121Right-handed alpha
Helix 123
AN6
A
4129 4138Right-handed alpha
Helix 124
AN7
A
4142 4144Right-handed 310
Helix 125
AN8
A
4145 4150Right-handed alpha
Helix 126
AN9
A
4150 4161Right-handed alpha
Helix 127
AO1
A
4164 4168Right-handed 310
Helix 128
AO2
A
4202 4217Right-handed alpha
Helix 129
AO3
A
4219 4234Right-handed alpha
Helix 130
AO4
A
4235 4240Right-handed alpha
Helix 131
AO5
A
4243 4252Right-handed alpha
Helix 132
AO6
A
4258 4265Right-handed alpha
Helix 133
AO7
A
4275 4288Right-handed alpha
Helix 134
AO8
A
4289 4302Right-handed alpha
Helix 135
AO9
A
4310 4313Right-handed 310
Helix 136
AP1
A
4352 4364Right-handed alpha
Back to top of page

There are 11 sheets in PDB entry 7MWD. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 200first strand
Strand 2
A
224 226anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
698 699first strand
Strand 2
A
763 764parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1626 1629first strand
Strand 2
A
1617 1621anti-parallel
Strand 3
A
1675 1680anti-parallel
Strand 4
A
1666 1669anti-parallel
Strand 5
A
1656 1661anti-parallel
Strand 6
A
1648 1653anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1893 1895first strand
Strand 2
A
1925 1927anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3289 3293first strand
Strand 2
A
3296 3299anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3301 3302first strand
Strand 2
A
3323 3324anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4016 4021first strand
Strand 2
A
4045 4050parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4081 4082first strand
Strand 2
A
4092 4093anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4175 4180first strand
Strand 2
A
4183 4188anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4266 4268first strand
Strand 2
A
4323 4328parallel
Strand 3
A
4344 4348parallel
Strand 4
A
4337 4339anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4315 4316first strand
Strand 2
A
4319 4320anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il