Analysis of interatomic Contacts of Structural Units in PDB entry:
7MWR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MWR entry

There are 2 chains in PDB entry 7MWR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1GLY 202
B
 TYR 1GLY 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 17 helices in PDB entry 7MWR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 18Right-handed alpha
Helix 2
AA2
A
22 40Right-handed alpha
Helix 3
AA3
A
43 61Right-handed alpha
Helix 4
AA4
A
65 83Right-handed alpha
Helix 5
AA5
A
86 105Right-handed alpha
Helix 6
AA6
A
108 125Right-handed alpha
Helix 7
AA7
A
129 145Right-handed alpha
Helix 8
AA8
A
165 183Right-handed alpha
Helix 9
AA9
B
2 22Right-handed alpha
Helix 10
AB1
B
25 47Right-handed alpha
Helix 11
AB2
B
50 72Right-handed alpha
Helix 12
AB3
B
75 97Right-handed alpha
Helix 13
AB4
B
100 123Right-handed alpha
Helix 14
AB5
B
125 147Right-handed alpha
Helix 15
AB6
B
150 172Right-handed alpha
Helix 16
AB7
B
175 192Right-handed alpha
Helix 17
AB8
B
212 231Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 7MWR.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 152first strand
Strand 2
A
156 162anti-parallel
Strand 3
A
195 201anti-parallel
Strand 4
A
186 192anti-parallel
Strand 5
B
233 239anti-parallel
Strand 6
B
242 248anti-parallel
Strand 7
B
203 209anti-parallel
Strand 8
B
194 199anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il