Analysis of interatomic Contacts of Structural Units in PDB entry:
7MWX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MWX entry

There are 8 chains in PDB entry 7MWX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	GLY 418	PHE 650
G	ASN 415	ASP 654
A	GLU 1	ARG 218
B	ASP 1	ASN 218
D	ILE 16	SER 96
E	GLU 1	ARG 218
F	ASP 1	ASN 218
H	LYS 13	THR 46

There are 26 helices in PDB entry 7MWX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	598	602	Right-handed alpha
Helix 2	AA2	C	617	622	Right-handed alpha
Helix 3	AA3	C	623	626	Right-handed 310
Helix 4	AA4	G	438	443	Right-handed alpha
Helix 5	AA5	G	597	602	Right-handed alpha
Helix 6	AA6	G	617	622	Right-handed alpha
Helix 7	AA7	G	623	626	Right-handed 310
Helix 8	AA8	A	28	32	Right-handed 310
Helix 9	AA9	A	87	91	Right-handed 310
Helix 10	AB1	B	85	89	Right-handed 310
Helix 11	AB2	B	127	134	Right-handed alpha
Helix 12	AB3	B	189	195	Right-handed alpha
Helix 13	AB4	D	17	32	Right-handed alpha
Helix 14	AB5	D	40	52	Right-handed alpha
Helix 15	AB6	D	64	69	Right-handed alpha
Helix 16	AB7	D	86	95	Right-handed alpha
Helix 17	AB8	E	28	32	Right-handed 310
Helix 18	AB9	E	87	91	Right-handed 310
Helix 19	AC1	F	85	89	Right-handed 310
Helix 20	AC2	F	127	134	Right-handed alpha
Helix 21	AC3	F	189	195	Right-handed alpha
Helix 22	AC4	H	14	31	Right-handed alpha
Helix 23	AC5	H	40	52	Right-handed alpha
Helix 24	AC6	H	59	63	Right-handed 310
Helix 25	AC7	H	64	69	Right-handed alpha
Helix 26	AC8	H	86	95	Right-handed alpha

There are 26 sheets in PDB entry 7MWX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	494	495	first strand
Strand 2	C	563	567	parallel
Strand 3	C	553	557	anti-parallel
Strand 4	C	505	511	anti-parallel
Strand 5	C	515	517	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	611	613	first strand
Strand 2	C	641	648	anti-parallel
Strand 3	C	629	636	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	515	517	first strand
Strand 2	G	509	511	anti-parallel
Strand 3	G	553	556	anti-parallel
Strand 4	G	564	565	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	611	613	first strand
Strand 2	G	641	648	anti-parallel
Strand 3	G	629	636	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	6	first strand
Strand 2	A	18	25	anti-parallel
Strand 3	A	78	83	anti-parallel
Strand 4	A	68	73	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	12	first strand
Strand 2	A	112	116	parallel
Strand 3	A	92	99	anti-parallel
Strand 4	A	33	39	anti-parallel
Strand 5	A	45	51	anti-parallel
Strand 6	A	58	60	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	12	first strand
Strand 2	A	112	116	parallel
Strand 3	A	92	99	anti-parallel
Strand 4	A	107	108	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	129	first strand
Strand 2	A	141	150	anti-parallel
Strand 3	A	180	188	anti-parallel
Strand 4	A	168	170	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	129	first strand
Strand 2	A	141	150	anti-parallel
Strand 3	A	180	188	anti-parallel
Strand 4	A	174	175	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	159	first strand
Strand 2	A	199	204	anti-parallel
Strand 3	A	209	214	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	7	first strand
Strand 2	B	19	25	anti-parallel
Strand 3	B	76	81	anti-parallel
Strand 4	B	68	73	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	14	first strand
Strand 2	B	108	113	parallel
Strand 3	B	90	96	anti-parallel
Strand 4	B	39	44	anti-parallel
Strand 5	B	51	55	anti-parallel
Strand 6	B	59	60	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	30	31	first strand
Strand 2	B	36	37	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	120	124	first strand
Strand 2	B	135	145	anti-parallel
Strand 3	B	179	188	anti-parallel
Strand 4	B	165	169	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	161	first strand
Strand 2	B	150	156	anti-parallel
Strand 3	B	198	204	anti-parallel
Strand 4	B	211	215	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	4	6	first strand
Strand 2	E	18	24	anti-parallel
Strand 3	E	78	83	anti-parallel
Strand 4	E	68	73	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	12	first strand
Strand 2	E	112	116	parallel
Strand 3	E	92	99	anti-parallel
Strand 4	E	33	39	anti-parallel
Strand 5	E	45	51	anti-parallel
Strand 6	E	58	60	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	12	first strand
Strand 2	E	112	116	parallel
Strand 3	E	92	99	anti-parallel
Strand 4	E	107	108	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	125	129	first strand
Strand 2	E	143	150	anti-parallel
Strand 3	E	180	186	anti-parallel
Strand 4	E	168	170	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	125	129	first strand
Strand 2	E	143	150	anti-parallel
Strand 3	E	180	186	anti-parallel
Strand 4	E	174	175	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	156	159	first strand
Strand 2	E	199	204	anti-parallel
Strand 3	E	209	214	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	7	first strand
Strand 2	F	19	25	anti-parallel
Strand 3	F	76	81	anti-parallel
Strand 4	F	68	73	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	14	first strand
Strand 2	F	108	113	parallel
Strand 3	F	90	96	anti-parallel
Strand 4	F	39	44	anti-parallel
Strand 5	F	51	55	anti-parallel
Strand 6	F	59	60	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	30	31	first strand
Strand 2	F	36	37	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	120	124	first strand
Strand 2	F	135	145	anti-parallel
Strand 3	F	179	188	anti-parallel
Strand 4	F	165	169	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	159	161	first strand
Strand 2	F	151	156	anti-parallel
Strand 3	F	198	203	anti-parallel
Strand 4	F	211	215	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MWX

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MWX