Analysis of interatomic Contacts of Structural Units in PDB entry:
7MY0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MY0 entry

There are 2 chains in PDB entry 7MY0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 7HIS 305
B
ARG 7GLU 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7MY0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
11 31Right-handed alpha
Helix 2
AA2
A
36 48Right-handed alpha
Helix 3
AA3
A
53 66Right-handed alpha
Helix 4
AA4
A
69 93Right-handed alpha
Helix 5
AA5
A
107 113Right-handed alpha
Helix 6
AA6
A
113 136Right-handed alpha
Helix 7
AA7
A
140 156Right-handed alpha
Helix 8
AA8
A
159 171Right-handed alpha
Helix 9
AA9
A
177 189Right-handed alpha
Helix 10
AB1
A
189 204Right-handed alpha
Helix 11
AB2
A
207 237Right-handed alpha
Helix 12
AB3
A
255 261Right-handed alpha
Helix 13
AB4
A
261 281Right-handed alpha
Helix 14
AB5
A
282 286Right-handed 310
Helix 15
AB6
A
287 304Right-handed alpha
Helix 16
AB7
B
11 31Right-handed alpha
Helix 17
AB8
B
36 48Right-handed alpha
Helix 18
AB9
B
53 66Right-handed alpha
Helix 19
AC1
B
69 93Right-handed alpha
Helix 20
AC2
B
107 113Right-handed alpha
Helix 21
AC3
B
113 136Right-handed alpha
Helix 22
AC4
B
140 156Right-handed alpha
Helix 23
AC5
B
159 171Right-handed alpha
Helix 24
AC6
B
177 189Right-handed alpha
Helix 25
AC7
B
189 204Right-handed alpha
Helix 26
AC8
B
207 240Right-handed alpha
Helix 27
AC9
B
255 261Right-handed alpha
Helix 28
AD1
B
261 281Right-handed alpha
Helix 29
AD2
B
282 286Right-handed 310
Helix 30
AD3
B
287 304Right-handed alpha
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There are 2 sheets in PDB entry 7MY0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
101 102first strand
Strand 2
A
105 106anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
101 102first strand
Strand 2
B
105 106anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il