Analysis of interatomic Contacts of Structural Units in PDB entry:
7MY2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7MY2 entry

There are 6 chains in PDB entry 7MY2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	PRO 26	LYS 1149
C	PRO 26	LYS 1149
E	PRO 26	LYS 1149
H	VAL 2	SER 113
A	VAL 2	SER 113
D	VAL 2	SER 113

There are 69 helices in PDB entry 7MY2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	294	304	Right-handed alpha
Helix 2	AA2	B	339	344	Right-handed alpha
Helix 3	AA3	B	365	370	Right-handed alpha
Helix 4	AA4	B	383	387	Right-handed 310
Helix 5	AA5	B	405	410	Right-handed 310
Helix 6	AA6	B	417	422	Right-handed alpha
Helix 7	AA7	B	619	624	Right-handed alpha
Helix 8	AA8	B	633	637	Right-handed 310
Helix 9	AA9	B	737	743	Right-handed alpha
Helix 10	AB1	B	746	754	Right-handed alpha
Helix 11	AB2	B	755	757	Right-handed 310
Helix 12	AB3	B	758	783	Right-handed alpha
Helix 13	AB4	B	816	826	Right-handed alpha
Helix 14	AB5	B	866	885	Right-handed alpha
Helix 15	AB6	B	886	890	Right-handed 310
Helix 16	AB7	B	897	909	Right-handed alpha
Helix 17	AB8	B	913	918	Right-handed alpha
Helix 18	AB9	B	919	940	Right-handed alpha
Helix 19	AC1	B	945	965	Right-handed alpha
Helix 20	AC2	B	966	968	Right-handed 310
Helix 21	AC3	B	976	983	Right-handed alpha
Helix 22	AC4	B	985	1033	Right-handed alpha
Helix 23	AC5	B	1141	1147	Right-handed alpha
Helix 24	AC6	C	294	304	Right-handed alpha
Helix 25	AC7	C	365	370	Right-handed alpha
Helix 26	AC8	C	384	388	Right-handed 310
Helix 27	AC9	C	403	407	Right-handed 310
Helix 28	AD1	C	417	422	Right-handed alpha
Helix 29	AD2	C	630	634	Right-handed 310
Helix 30	AD3	C	737	743	Right-handed alpha
Helix 31	AD4	C	746	755	Right-handed alpha
Helix 32	AD5	C	758	783	Right-handed alpha
Helix 33	AD6	C	816	826	Right-handed alpha
Helix 34	AD7	C	866	885	Right-handed alpha
Helix 35	AD8	C	886	890	Right-handed 310
Helix 36	AD9	C	897	908	Right-handed alpha
Helix 37	AE1	C	913	918	Right-handed alpha
Helix 38	AE2	C	919	941	Right-handed alpha
Helix 39	AE3	C	945	965	Right-handed alpha
Helix 40	AE4	C	976	984	Right-handed alpha
Helix 41	AE5	C	985	1034	Right-handed alpha
Helix 42	AE6	C	1141	1148	Right-handed alpha
Helix 43	AE7	E	294	304	Right-handed alpha
Helix 44	AE8	E	338	343	Right-handed alpha
Helix 45	AE9	E	365	369	Right-handed 310
Helix 46	AF1	E	385	390	Right-handed 310
Helix 47	AF2	E	406	410	Right-handed 310
Helix 48	AF3	E	417	422	Right-handed alpha
Helix 49	AF4	E	502	506	Right-handed 310
Helix 50	AF5	E	619	624	Right-handed alpha
Helix 51	AF6	E	630	635	Right-handed alpha
Helix 52	AF7	E	737	743	Right-handed alpha
Helix 53	AF8	E	746	754	Right-handed alpha
Helix 54	AF9	E	755	757	Right-handed 310
Helix 55	AG1	E	758	783	Right-handed alpha
Helix 56	AG2	E	816	826	Right-handed alpha
Helix 57	AG3	E	866	885	Right-handed alpha
Helix 58	AG4	E	897	908	Right-handed alpha
Helix 59	AG5	E	913	918	Right-handed alpha
Helix 60	AG6	E	919	940	Right-handed alpha
Helix 61	AG7	E	945	965	Right-handed alpha
Helix 62	AG8	E	966	968	Right-handed 310
Helix 63	AG9	E	976	983	Right-handed alpha
Helix 64	AH1	E	985	1033	Right-handed alpha
Helix 65	AH2	E	1140	1148	Right-handed alpha
Helix 66	AH3	H	62	65	Right-handed 310
Helix 67	AH4	A	83	87	Right-handed 310
Helix 68	AH5	D	63	65	Right-handed 310
Helix 69	AH6	D	83	87	Right-handed 310

There are 46 sheets in PDB entry 7MY2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	30	first strand
Strand 2	B	61	65	anti-parallel
Strand 3	B	264	269	anti-parallel
Strand 4	B	90	96	anti-parallel
Strand 5	B	188	197	anti-parallel
Strand 6	B	200	209	anti-parallel
Strand 7	B	222	229	anti-parallel
Strand 8	B	36	37	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	43	first strand
Strand 2	E	565	567	parallel
Strand 3	E	573	577	anti-parallel
Strand 4	E	584	588	anti-parallel
Strand 5	E	546	554	anti-parallel
Strand 6	E	538	543	anti-parallel
Strand 7	E	325	328	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	237	241	anti-parallel
Strand 3	B	103	107	anti-parallel
Strand 4	B	115	122	anti-parallel
Strand 5	B	125	132	anti-parallel
Strand 6	B	168	172	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	319	first strand
Strand 2	B	592	599	anti-parallel
Strand 3	B	609	613	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	642	645	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	326	327	first strand
Strand 2	B	539	542	parallel
Strand 3	B	547	554	anti-parallel
Strand 4	B	584	588	anti-parallel
Strand 5	B	573	577	anti-parallel
Strand 6	B	565	567	anti-parallel
Strand 7	C	42	43	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	378	380	first strand
Strand 2	B	431	437	anti-parallel
Strand 3	B	507	514	anti-parallel
Strand 4	B	397	403	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	454	first strand
Strand 2	B	492	494	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	655	first strand
Strand 2	B	692	696	parallel
Strand 3	B	670	674	anti-parallel
Strand 4	B	664	667	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	702	704	first strand
Strand 2	C	788	790	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	728	first strand
Strand 2	B	1059	1078	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	728	first strand
Strand 2	B	1059	1078	anti-parallel
Strand 3	B	1094	1097	anti-parallel
Strand 4	B	1102	1105	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	733	736	first strand
Strand 2	B	858	861	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1122	first strand
Strand 2	B	1086	1090	anti-parallel
Strand 3	B	1081	1083	anti-parallel
Strand 4	B	1133	1134	parallel

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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	30	first strand
Strand 2	C	61	65	anti-parallel
Strand 3	C	265	269	anti-parallel
Strand 4	C	90	94	anti-parallel
Strand 5	C	189	197	anti-parallel
Strand 6	C	200	208	anti-parallel
Strand 7	C	222	229	anti-parallel
Strand 8	C	36	37	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	55	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	285	290	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	237	242	anti-parallel
Strand 3	C	101	107	anti-parallel
Strand 4	C	116	121	anti-parallel
Strand 5	C	126	129	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	319	first strand
Strand 2	C	592	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	645	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	326	327	first strand
Strand 2	C	539	542	parallel
Strand 3	C	547	554	anti-parallel
Strand 4	C	584	588	anti-parallel
Strand 5	C	573	577	anti-parallel
Strand 6	C	565	567	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	376	379	first strand
Strand 2	C	431	436	anti-parallel
Strand 3	C	508	514	anti-parallel
Strand 4	C	398	402	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	453	first strand
Strand 2	C	493	494	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	655	first strand
Strand 2	C	692	696	parallel
Strand 3	C	670	674	anti-parallel
Strand 4	C	664	667	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	702	704	first strand
Strand 2	E	788	790	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	714	first strand
Strand 2	C	1073	1078	anti-parallel
Strand 3	C	1094	1097	anti-parallel
Strand 4	C	1102	1105	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	717	728	first strand
Strand 2	C	1059	1070	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	733	736	first strand
Strand 2	C	858	861	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1122	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1081	1083	anti-parallel
Strand 4	C	1133	1134	parallel

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There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	29	31	first strand
Strand 2	E	60	65	anti-parallel
Strand 3	E	265	269	anti-parallel
Strand 4	E	90	94	anti-parallel
Strand 5	E	187	197	anti-parallel
Strand 6	E	200	210	anti-parallel
Strand 7	E	222	229	anti-parallel
Strand 8	E	36	37	parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	47	55	first strand
Strand 2	E	271	279	anti-parallel
Strand 3	E	285	290	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	169	172	first strand
Strand 2	E	126	129	anti-parallel
Strand 3	E	117	121	anti-parallel
Strand 4	E	101	107	anti-parallel
Strand 5	E	237	242	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	309	319	first strand
Strand 2	E	592	601	anti-parallel
Strand 3	E	609	613	anti-parallel
Strand 4	E	648	651	anti-parallel
Strand 5	E	642	645	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	356	358	first strand
Strand 2	E	393	402	anti-parallel
Strand 3	E	508	516	anti-parallel
Strand 4	E	432	437	anti-parallel
Strand 5	E	376	379	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	452	454	first strand
Strand 2	E	492	494	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	654	655	first strand
Strand 2	E	692	696	parallel
Strand 3	E	670	674	anti-parallel
Strand 4	E	664	667	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	711	714	first strand
Strand 2	E	1073	1078	anti-parallel
Strand 3	E	1094	1097	anti-parallel
Strand 4	E	1102	1105	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	717	728	first strand
Strand 2	E	1059	1070	anti-parallel
Strand 3	E	1047	1056	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	733	736	first strand
Strand 2	E	858	861	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1120	1122	first strand
Strand 2	E	1086	1090	anti-parallel
Strand 3	E	1081	1083	anti-parallel
Strand 4	E	1133	1134	parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	5	7	first strand
Strand 2	H	18	23	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	67	72	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	57	59	first strand
Strand 2	H	45	51	anti-parallel
Strand 3	H	33	39	anti-parallel
Strand 4	H	89	95	anti-parallel
Strand 5	H	107	108	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	5	first strand
Strand 2	A	18	24	anti-parallel
Strand 3	A	77	82	anti-parallel
Strand 4	A	67	71	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	51	first strand
Strand 2	A	33	39	anti-parallel
Strand 3	A	88	95	anti-parallel
Strand 4	A	102	103	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	51	first strand
Strand 2	A	33	39	anti-parallel
Strand 3	A	88	95	anti-parallel
Strand 4	A	107	109	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	5	first strand
Strand 2	D	18	24	anti-parallel
Strand 3	D	77	82	anti-parallel
Strand 4	D	67	72	anti-parallel

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There are 5 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	59	first strand
Strand 2	D	45	51	anti-parallel
Strand 3	D	33	39	anti-parallel
Strand 4	D	88	95	anti-parallel
Strand 5	D	102	103	anti-parallel

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There are 5 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	59	first strand
Strand 2	D	45	51	anti-parallel
Strand 3	D	33	39	anti-parallel
Strand 4	D	88	95	anti-parallel
Strand 5	D	107	109	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7MY2

Analysis of interatomic Contacts of Structural Units in PDB entry:
7MY2