Analysis of interatomic Contacts of Structural Units in PDB entry:
7MYO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MYO entry

There are 2 chains in PDB entry 7MYO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 THR 315ASN 600
A
 PRO 18GLY 1050
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 7MYO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
339 348Right-handed alpha
Helix 2
AA2
B
385 389Right-handed 310
Helix 3
AA3
B
400 411Right-handed alpha
Helix 4
AA4
B
432 436Right-handed 310
Helix 5
AA5
B
441 506Right-handed alpha
Helix 6
AA6
B
508 515Right-handed alpha
Helix 7
AA7
B
518 588Right-handed alpha
Helix 8
AA8
B
593 599Right-handed alpha
Helix 9
AA9
A
41 56Right-handed alpha
Helix 10
AB1
A
107 122Right-handed alpha
Helix 11
AB2
A
124 131Right-handed alpha
Helix 12
AB3
A
133 155Right-handed alpha
Helix 13
AB4
A
159 167Right-handed alpha
Helix 14
AB5
A
178 183Right-handed alpha
Helix 15
AB6
A
216 229Right-handed alpha
Helix 16
AB7
A
241 248Right-handed alpha
Helix 17
AB8
A
270 280Right-handed alpha
Helix 18
AB9
A
290 297Right-handed alpha
Helix 19
AC1
A
306 310Right-handed 310
Helix 20
AC2
A
326 330Right-handed 310
Helix 21
AC3
A
394 396Right-handed 310
Helix 22
AC4
A
488 502Right-handed alpha
Helix 23
AC5
A
524 536Right-handed alpha
Helix 24
AC6
A
544 554Right-handed alpha
Helix 25
AC7
A
564 571Right-handed alpha
Helix 26
AC8
A
577 589Right-handed alpha
Helix 27
AC9
A
594 599Right-handed alpha
Helix 28
AD1
A
600 603Right-handed 310
Helix 29
AD2
A
608 623Right-handed alpha
Helix 30
AD3
A
624 631Right-handed alpha
Helix 31
AD4
A
631 642Right-handed alpha
Helix 32
AD5
A
647 658Right-handed alpha
Helix 33
AD6
A
660 673Right-handed alpha
Helix 34
AD7
A
680 695Right-handed alpha
Helix 35
AD8
A
697 721Right-handed alpha
Helix 36
AD9
A
732 740Right-handed alpha
Helix 37
AE1
A
741 746Right-handed alpha
Helix 38
AE2
A
747 749Right-handed 310
Helix 39
AE3
A
787 793Right-handed 310
Helix 40
AE4
A
808 828Right-handed alpha
Helix 41
AE5
A
857 867Right-handed alpha
Helix 42
AE6
A
875 885Right-handed alpha
Helix 43
AE7
A
886 888Right-handed 310
Helix 44
AE8
A
889 911Right-handed alpha
Helix 45
AE9
A
957 965Right-handed alpha
Helix 46
AF1
A
974 993Right-handed alpha
Helix 47
AF2
A
994 1004Right-handed alpha
Helix 48
AF3
A
1019 1026Right-handed alpha
Helix 49
AF4
A
1031 1045Right-handed alpha
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There are 10 sheets in PDB entry 7MYO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
354 355first strand
Strand 2
B
426 427parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
373 374first strand
Strand 2
B
377 378anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 36first strand
Strand 2
A
20 25anti-parallel
Strand 3
A
98 102parallel
Strand 4
A
69 73anti-parallel
Strand 5
A
79 82anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 212first strand
Strand 2
A
189 194anti-parallel
Strand 3
A
284 289parallel
Strand 4
A
250 254anti-parallel
Strand 5
A
260 261anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
382 392first strand
Strand 2
A
333 341anti-parallel
Strand 3
A
472 476anti-parallel
Strand 4
A
440 444anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
360 362anti-parallel
Strand 3
A
401 409anti-parallel
Strand 4
A
353 355anti-parallel
Strand 5
A
376 377anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
360 362anti-parallel
Strand 3
A
401 409anti-parallel
Strand 4
A
419 428anti-parallel
Strand 5
A
446 447anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
752 753first strand
Strand 2
A
756 760anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
770 771first strand
Strand 2
A
779 784anti-parallel
Strand 3
A
796 803anti-parallel
Strand 4
A
845 849anti-parallel
Strand 5
A
838 840anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
854 856first strand
Strand 2
A
921 924anti-parallel
Strand 3
A
929 931anti-parallel
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