Analysis of interatomic Contacts of Structural Units in PDB entry:
7MYV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MYV entry

There are 2 chains in PDB entry 7MYV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 9PHE 246
B
 LYS 8PHE 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7MYV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 39Right-handed alpha
Helix 2
AA2
A
52 61Right-handed alpha
Helix 3
AA3
A
62 66Right-handed 310
Helix 4
AA4
A
73 75Right-handed 310
Helix 5
AA5
A
89 112Right-handed alpha
Helix 6
AA6
A
139 154Right-handed alpha
Helix 7
AA7
A
154 167Right-handed alpha
Helix 8
AA8
A
168 170Right-handed 310
Helix 9
AA9
A
191 198Right-handed 310
Helix 10
AB1
A
218 223Right-handed alpha
Helix 11
AB2
A
234 246Right-handed alpha
Helix 12
AB3
B
27 39Right-handed alpha
Helix 13
AB4
B
52 61Right-handed alpha
Helix 14
AB5
B
62 66Right-handed 310
Helix 15
AB6
B
72 74Right-handed 310
Helix 16
AB7
B
88 93Right-handed alpha
Helix 17
AB8
B
94 112Right-handed alpha
Helix 18
AB9
B
139 154Right-handed alpha
Helix 19
AC1
B
154 165Right-handed alpha
Helix 20
AC2
B
190 198Right-handed 310
Helix 21
AC3
B
218 224Right-handed alpha
Helix 22
AC4
B
234 244Right-handed alpha
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There are 4 sheets in PDB entry 7MYV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 79first strand
Strand 2
A
68 71anti-parallel
Strand 3
A
44 49parallel
Strand 4
A
10 13parallel
Strand 5
A
205 209parallel
Strand 6
A
228 231parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 124first strand
Strand 2
A
129 131anti-parallel
Strand 3
A
182 186anti-parallel
Strand 4
A
172 176anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 86first strand
Strand 2
B
76 79anti-parallel
Strand 3
B
68 71anti-parallel
Strand 4
B
43 48parallel
Strand 5
B
9 13parallel
Strand 6
B
204 209parallel
Strand 7
B
228 231parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 124first strand
Strand 2
B
129 131anti-parallel
Strand 3
B
181 186anti-parallel
Strand 4
B
172 177anti-parallel
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